HHsearch alignment for GI: peg_409 and conserved domain: PRK09302

>PRK09302 circadian clock protein KaiC; Reviewed.
Probab=95.68  E-value=0.0059  Score=40.54  Aligned_cols=42  Identities=19%  Similarity=0.171  Sum_probs=34.8

Q ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf             888799848889967999999999982478988956677687899
Q 537021.9.peg.4   31 TRSAWVSANAGSGKTHILVQRVLRLLLANAHPSTLLCLTHTKAAA   75 (242)
Q Consensus        31 ~~~~lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~lTFT~kAA   75 (242)
T Consensus       266 GsstLi~Gp~GtGKTtla~qFl~~~a~~G---E~~l~~~FeE~~~  307 (501)
T PRK09302        266 GSIILVSGATGTGKTLLVSKFAEAACRRG---ERCLLFAFEESRA  307 (501)
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHHHCC---CCEEEEEEECCHH
T ss_conf             94699988999888999999999998659---9089999967999