HHsearch alignment for GI: peg_409 and conserved domain: PRK09376

>PRK09376 rho transcription termination factor Rho; Provisional.
Probab=92.26  E-value=0.2  Score=29.79  Aligned_cols=27  Identities=19%  Similarity=0.278  Sum_probs=20.6

Q ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf             8887998488899679999999999824
Q 537021.9.peg.4   31 TRSAWVSANAGSGKTHILVQRVLRLLLA   58 (242)
Q Consensus        31 ~~~~lV~A~aGSGKT~tL~~rv~~ll~~   58 (242)
T Consensus       169 GQRgLIVAPPkaGKT~lLq~-IA~aI~~  195 (416)
T PRK09376        169 GQRGLIVAPPKAGKTVLLQN-IANSITT  195 (416)
T ss_pred             CCCCEEECCCCCCHHHHHHH-HHHHHHH
T ss_conf             85003756998754799999-9999985