HHsearch alignment for GI: peg_409 and conserved domain: PRK09694

Probab=97.46  E-value=0.0037  Score=41.97  Aligned_cols=158  Identities=19%  Similarity=0.202  Sum_probs=84.6

Q ss_pred             HHCCCHHHHHHHCCCCC--EEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             35094899998276888--7998488899679999999999824789889566776878999999999999677521674
Q 537021.9.peg.4   17 ISQTKSEQLLASDPTRS--AWVSANAGSGKTHILVQRVLRLLLANAHPSTLLCLTHTKAAAAEMSHRVLEIITAWSHLSD   94 (242)
Q Consensus        17 ~~~~~~qq~~a~~~~~~--~lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~lTFT~kAA~El~~RI~~~l~~~~~~~~   94 (242)
T Consensus       287 ~~PrplQ~~~~~l~~~PgL~IiEAptG~GKTEAAL~~A~~L~~~~-~~~Gl~faLPT~ATaNaMf~Rv~~~~~~~~~~~~  365 (878)
T PRK09694        287 YQPRQLQTLVDALPLAPGLTVIEAPTGSGKTETALAYAWKLIDQQ-LADSVIFALPTQATANAMLSRMEAAASKLFPSPN  365 (878)
T ss_pred             CCCCHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHC-CCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             999679999984567998799975899975899999999999734-8983699774798899999999999997368997


Q ss_pred             CCCHHH-------HHHHHCCC---C-CHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHH---HHHHHCCCCCCCC
Q ss_conf             221464-------99731479---9-9789999999999--99831001321117999987555---4289758899985
Q 537021.9.peg.4   95 EILSAE-------ITKIQGKK---P-NKSDMSKARHLLI--TILETPGGLKVQTIHAFCEAIMQ---QFPLEANITSHFA  158 (242)
Q Consensus        95 ~~~~~~-------l~~~~~~~---~-~~~~~~~~~~ll~--~~l~~~~~~~i~Ti~~f~~~ilr---~~~~~~gl~~~f~  158 (242)
T Consensus       366 v~LaHg~a~l~~~~~~l~~~~~~~~~~~~~~~~~~~W~~~~~Kr~LLap~~VGTiDQaLla~L~~kH~~LR~~gLa~kvv  445 (878)
T PRK09694        366 LILAHGNSRFNHLFQSIKSRAITEQGQEEAWVQCCQWLSQSNKRVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVL  445 (878)
T ss_pred             EEEECCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCCEECCHHHHHHHHHCCCHHHHHHHHHCCCEE
T ss_conf             69744736550566651013676544543015777664111022313771546799999987461489999998628748


Q ss_pred             CCCCH-----HHHHHHHHHHHH
Q ss_conf             16837-----899999999999
Q 537021.9.peg.4  159 IADEE-----QSKKLIEEAKKS  175 (242)
Q Consensus       159 i~d~~-----~~~~l~~~~~~~  175 (242)
T Consensus       446 IiDEVHAYD~Ym~~lL~~lL~w  467 (878)
T PRK09694        446 IVDEVHAYDAYMNGLLEAVLKA  467 (878)
T ss_pred             EEECCCCCCHHHHHHHHHHHHH
T ss_conf             9725333458899999999999