HHsearch alignment for GI: peg_409 and conserved domain: PRK11054

Probab=99.93  E-value=6.6e-26  Score=201.95  Aligned_cols=103  Identities=33%  Similarity=0.389  Sum_probs=85.1

Q ss_pred             HHHHHHHHH--HCCCHHHHHHH-CCCCCEEEEECCCCCHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             888897323--50948999982-7688879984888996799999999998247-8988956677687899999999999
Q 537021.9.peg.4    9 EHSETIDLI--SQTKSEQLLAS-DPTRSAWVSANAGSGKTHILVQRVLRLLLAN-AHPSTLLCLTHTKAAAAEMSHRVLE   84 (242)
Q Consensus         9 ~~~~~~~~~--~~~~~qq~~a~-~~~~~~lV~A~aGSGKT~tL~~rv~~ll~~g-~~P~~IL~lTFT~kAA~El~~RI~~   84 (242)
T Consensus       184 ~~~~fF~~~es~PLn~~Qr~Avi~~ed~~LVLAGAGSGKT~vLt~RiayLI~~g~~~P~~ILaLTFT~kAA~EMreRl~~  263 (684)
T PRK11054        184 EWADFFSQVESSPLNPSQARAVVNGEDSLLVLAGAGSGKTSVLVARAGWLLARGQAQPEQILLLAFGRKAAEEMDERIRE  263 (684)
T ss_pred             HHHHHHHHHCCCCCCHHHHHHEEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHEEEEECCHHHHHHHHHHHHH
T ss_conf             99999887417999989995727479964898338997077999999999975999866778686349999999999997


Q ss_pred             HHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             9677521674221464997314799978999999999999831001321117999987555428975
Q 537021.9.peg.4   85 IITAWSHLSDEILSAEITKIQGKKPNKSDMSKARHLLITILETPGGLKVQTIHAFCEAIMQQFPLEA  151 (242)
Q Consensus        85 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ll~~~l~~~~~~~i~Ti~~f~~~ilr~~~~~~  151 (242)
T Consensus       264 ~lg~----------------------------------------~~v~~~TFHSlal~ILr~~~~~~  290 (684)
T PRK11054        264 RLGT----------------------------------------EDITARTFHALALHIIQQGSKKV  290 (684)
T ss_pred             HCCC----------------------------------------CCEEEEEHHHHHHHHHHHHCCCC
T ss_conf             5499----------------------------------------98378659999999999844457