HHsearch alignment for GI: peg_409 and conserved domain: PRK11131

>PRK11131 ATP-dependent RNA helicase HrpA; Provisional.
Probab=92.64  E-value=0.15  Score=30.68  Aligned_cols=51  Identities=27%  Similarity=0.290  Sum_probs=32.3

Q ss_pred             CEEEEECCCCCHHHHHHHHHHHHHHCC-------CCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             879984888996799999999998247-------8988956677687899999999999
Q 537021.9.peg.4   33 SAWVSANAGSGKTHILVQRVLRLLLAN-------AHPSTLLCLTHTKAAAAEMSHRVLE   84 (242)
Q Consensus        33 ~~lV~A~aGSGKT~tL~~rv~~ll~~g-------~~P~~IL~lTFT~kAA~El~~RI~~   84 (242)
T Consensus        91 Vvii~GeTGsGKTTQiPq~~le~-g~g~~~~I~~TQPRRiAA~svA~RVA~E~~~~lG~  148 (1295)
T PRK11131         91 VVIVAGETGSGKTTQLPKICLEL-GRGIKGLIGHTQPRRLAARTVANRIAEELETELGG  148 (1295)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHC-CCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             69997689998788999999962-79999989977965999999999999981999899