HHsearch alignment for GI: peg_409 and conserved domain: PRK11889

>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional.
Probab=93.51  E-value=0.068  Score=33.06  Aligned_cols=48  Identities=10%  Similarity=0.057  Sum_probs=32.4

Q ss_pred             EEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             799848889967999999999982478988956677687899999999
Q 537021.9.peg.4   34 AWVSANAGSGKTHILVQRVLRLLLANAHPSTLLCLTHTKAAAAEMSHR   81 (242)
Q Consensus        34 ~lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~lTFT~kAA~El~~R   81 (242)
T Consensus       244 IALVGPTGVGKTTTIAKLAArf~~~~KkVALITtDTYRIGAVEQLKTY  291 (436)
T PRK11889        244 IALIGPTGVGKTTTLAKMAWQFHGKKKTVGFITTDHSRIGTVQQLQDY  291 (436)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHH
T ss_conf             999899998889999999999861698089998066347699999999