HHsearch alignment for GI: peg_409 and conserved domain: PRK11889
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional.
Probab=93.51 E-value=0.068 Score=33.06 Aligned_cols=48 Identities=10% Similarity=0.057 Sum_probs=32.4
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 799848889967999999999982478988956677687899999999
Q 537021.9.peg.4 34 AWVSANAGSGKTHILVQRVLRLLLANAHPSTLLCLTHTKAAAAEMSHR 81 (242)
Q Consensus 34 ~lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~lTFT~kAA~El~~R 81 (242)
T Consensus 244 IALVGPTGVGKTTTIAKLAArf~~~~KkVALITtDTYRIGAVEQLKTY 291 (436)
T PRK11889 244 IALIGPTGVGKTTTLAKMAWQFHGKKKTVGFITTDHSRIGTVQQLQDY 291 (436)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHH
T ss_conf 999899998889999999999861698089998066347699999999