HHsearch alignment for GI: peg_409 and conserved domain: PRK12724

>PRK12724 flagellar biosynthesis regulator FlhF; Provisional.
Probab=93.63  E-value=0.062  Score=33.37  Aligned_cols=48  Identities=17%  Similarity=0.153  Sum_probs=32.8

Q ss_pred             EEEEECCCCCHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             79984888996799999999998-2478988956677687899999999
Q 537021.9.peg.4   34 AWVSANAGSGKTHILVQRVLRLL-LANAHPSTLLCLTHTKAAAAEMSHR   81 (242)
Q Consensus        34 ~lV~A~aGSGKT~tL~~rv~~ll-~~g~~P~~IL~lTFT~kAA~El~~R   81 (242)
T Consensus       226 i~lVGPTGVGKTTTiAKLAA~~~l~~~kkVaLIT~DTYRIgAvEQLktY  274 (432)
T PRK12724        226 VFFVGPTGSGKTTSIAKLAAKYFLHMGKSVSLYTTDNYRIAAIEQLKRY  274 (432)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHH
T ss_conf             9998999988899999999999997499279995266537799999999