HHsearch alignment for GI: peg_409 and conserved domain: PRK12724
>PRK12724 flagellar biosynthesis regulator FlhF; Provisional.
Probab=93.63 E-value=0.062 Score=33.37 Aligned_cols=48 Identities=17% Similarity=0.153 Sum_probs=32.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 79984888996799999999998-2478988956677687899999999
Q 537021.9.peg.4 34 AWVSANAGSGKTHILVQRVLRLL-LANAHPSTLLCLTHTKAAAAEMSHR 81 (242)
Q Consensus 34 ~lV~A~aGSGKT~tL~~rv~~ll-~~g~~P~~IL~lTFT~kAA~El~~R 81 (242)
T Consensus 226 i~lVGPTGVGKTTTiAKLAA~~~l~~~kkVaLIT~DTYRIgAvEQLktY 274 (432)
T PRK12724 226 VFFVGPTGSGKTTSIAKLAAKYFLHMGKSVSLYTTDNYRIAAIEQLKRY 274 (432)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHH
T ss_conf 9998999988899999999999997499279995266537799999999