HHsearch alignment for GI: peg_409 and conserved domain: PRK13341

>PRK13341 recombination factor protein RarA/unknown domain fusion protein; Reviewed.

Probab=92.69  E-value=0.17  Score=30.20  Aligned_cols=55  Identities=20%  Similarity=0.151  Sum_probs=28.8

Q ss_pred             HHHHHH-CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999982-7688879984888996799999999998247898895667768789999999999
Q 537021.9.peg.4   23 EQLLAS-DPTRSAWVSANAGSGKTHILVQRVLRLLLANAHPSTLLCLTHTKAAAAEMSHRVL   83 (242)
Q Consensus        23 qq~~a~-~~~~~~lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~lTFT~kAA~El~~RI~   83 (242)
T Consensus        43 Lrr~i~~~~~~S~Il~GPPGtGKTT-LA~iIA~~t~~-----~F~~lsAv~sgvkdlr~ii~   98 (726)
T PRK13341         43 LRRAIKADRVGSLILYGPPGVGKTT-LARIIANHTRA-----HFSSLNAVLAGVKDLRAEVD   98 (726)
T ss_pred             HHHHHHCCCCCEEEEECCCCCCHHH-HHHHHHHHHCC-----CEEEEECCCCCHHHHHHHHH
T ss_conf             9999976999827888979999999-99999887488-----67998562037799999999