HHsearch alignment for GI: peg_409 and conserved domain: PRK13766
>PRK13766 Hef nuclease; Provisional.
Probab=94.79 E-value=0.038 Score=34.87 Aligned_cols=63 Identities=24% Similarity=0.245 Sum_probs=46.2
Q ss_pred HHHHHHC-CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999827-6888799848889967999999999982478988956677687899999999999967
Q 537021.9.peg.4 23 EQLLASD-PTRSAWVSANAGSGKTHILVQRVLRLLLANAHPSTLLCLTHTKAAAAEMSHRVLEIIT 87 (242)
Q Consensus 23 qq~~a~~-~~~~~lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~lTFT~kAA~El~~RI~~~l~ 87 (242)
T Consensus 20 Q~el~~~Al~~NtiVvLPTG~GKT~IA~lvi~~~l~~--~~gKilFLaPT~pLV~Qq~~~~~~~l~ 83 (764)
T PRK13766 20 QQLLAAKALKGNTLVVLPTGLGKTAIALLVIAERLQK--YGGKVLILAPTKPLVEQHAEFFRKFLN 83 (764)
T ss_pred HHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHH--CCCEEEEECCCHHHHHHHHHHHHHHCC
T ss_conf 9999999985898999599866899999999999974--898899985888899999999999709