HHsearch alignment for GI: peg_409 and conserved domain: PRK13826
>PRK13826 Dtr system oriT relaxase; Provisional.
Probab=97.11 E-value=0.00096 Score=46.07 Aligned_cols=67 Identities=22% Similarity=0.138 Sum_probs=49.4
Q ss_pred HHHHHHHCCCHHHHHHH-C---CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89732350948999982-7---6888799848889967999999999982478988956677687899999999
Q 537021.9.peg.4 12 ETIDLISQTKSEQLLAS-D---PTRSAWVSANAGSGKTHILVQRVLRLLLANAHPSTLLCLTHTKAAAAEMSHR 81 (242)
Q Consensus 12 ~~~~~~~~~~~qq~~a~-~---~~~~~lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~lTFT~kAA~El~~R 81 (242)
T Consensus 374 ~a~~~~~~Ls~EQ~~Av~hiT~~~~Ia~VvG~AGaGKStmL~aAReawEa~G---yrV~GaALsGkAAegLe~~ 444 (1102)
T PRK13826 374 ATFARHARLSDEQKTAIEHVAGAERIAAVIGRAGAGKTTMMKAAREAWEAAG---YRVVGGALAGKAAEGLEKE 444 (1102)
T ss_pred HHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCC---CEEEEECCCHHHHHHHHHC
T ss_conf 9985021389999999998537886689984288878899999999999779---7798015007899977534