HHsearch alignment for GI: peg_409 and conserved domain: PRK13900
>PRK13900 type IV secretion system ATPase VirB11; Provisional.
Probab=94.08 E-value=0.045 Score=34.31 Aligned_cols=41 Identities=17% Similarity=0.211 Sum_probs=27.3
Q ss_pred HHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCH-HHHHHHHHH
Q ss_conf 9827688879984888996799999999998247898-895667768
Q 537021.9.peg.4 26 LASDPTRSAWVSANAGSGKTHILVQRVLRLLLANAHP-STLLCLTHT 71 (242)
Q Consensus 26 ~a~~~~~~~lV~A~aGSGKT~tL~~rv~~ll~~g~~P-~~IL~lTFT 71 (242)
T Consensus 155 ~aV~~r~NilI~G~TgSGKTTll~a-----L~~~ip~~eRiitIEDt 196 (332)
T PRK13900 155 HAVISKKNIIISGGTSTGKTTFTNA-----ALREIPAIERLITVEDA 196 (332)
T ss_pred HHHHCCCCEEEECCCCCCHHHHHHH-----HHHCCCCCCCEEEECCC
T ss_conf 9986487199988889889999999-----98358953535663140