HHsearch alignment for GI: peg_409 and conserved domain: PRK13900

>PRK13900 type IV secretion system ATPase VirB11; Provisional.
Probab=94.08  E-value=0.045  Score=34.31  Aligned_cols=41  Identities=17%  Similarity=0.211  Sum_probs=27.3

Q ss_pred             HHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCH-HHHHHHHHH
Q ss_conf             9827688879984888996799999999998247898-895667768
Q 537021.9.peg.4   26 LASDPTRSAWVSANAGSGKTHILVQRVLRLLLANAHP-STLLCLTHT   71 (242)
Q Consensus        26 ~a~~~~~~~lV~A~aGSGKT~tL~~rv~~ll~~g~~P-~~IL~lTFT   71 (242)
T Consensus       155 ~aV~~r~NilI~G~TgSGKTTll~a-----L~~~ip~~eRiitIEDt  196 (332)
T PRK13900        155 HAVISKKNIIISGGTSTGKTTFTNA-----ALREIPAIERLITVEDA  196 (332)
T ss_pred             HHHHCCCCEEEECCCCCCHHHHHHH-----HHHCCCCCCCEEEECCC
T ss_conf             9986487199988889889999999-----98358953535663140