HHsearch alignment for GI: peg_409 and conserved domain: TIGR00073

>TIGR00073 hypB hydrogenase accessory protein HypB; InterPro: IPR004392 The hydrogenase accessory protein HypB is a GTP hydrolase for assembly of nickel metallocentre of hydrogenase. A similar protein, ureG, is an accessory protein for urease, which also uses nickel.; GO: 0016151 nickel ion binding, 0006461 protein complex assembly.

Probab=94.10  E-value=0.034  Score=35.22  Aligned_cols=61  Identities=20%  Similarity=0.206  Sum_probs=33.4

Q ss_pred             CCHHHHHHHC------CCCC-EE-EEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9489999827------6888-79-98488899679999999999824789889566776878999999999999
Q 537021.9.peg.4   20 TKSEQLLASD------PTRS-AW-VSANAGSGKTHILVQRVLRLLLANAHPSTLLCLTHTKAAAAEMSHRVLEI   85 (242)
Q Consensus        20 ~~~qq~~a~~------~~~~-~l-V~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~lTFT~kAA~El~~RI~~~   85 (242)
T Consensus        15 L~~N~rlA~~Nr~~~~~~g~~~lNfmsspGSGKT~LiEk~~~~-~~~~~K~Avi~GD~~t~~D----A~RlR~~   83 (225)
T TIGR00073        15 LSKNDRLAEKNRERFDKEGLLVLNFMSSPGSGKTTLIEKLIER-LDDEVKIAVIEGDVQTKND----ADRLRKY   83 (225)
T ss_pred             HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHH-HCCCCCEEEEECCHHHHHH----HHHHHHC
T ss_conf             8988899999999998659789980258861158999999998-4578978999755322556----9999864