HHsearch alignment for GI: peg_409 and conserved domain: TIGR00631
>TIGR00631 uvrb excinuclease ABC, B subunit; InterPro: IPR004807 All proteins in this family for which functions are known are DNA helicases that function in the nucleotide excision repair and are endonucleases that make the 3' incision next to DNA damage. They are part of a pathway requiring UvrA, UvrB, UvrC, and UvrD homologs.; GO: 0009381 excinuclease ABC activity, 0006289 nucleotide-excision repair, 0005737 cytoplasm, 0009380 excinuclease repair complex.
Probab=95.63 E-value=0.015 Score=37.62 Aligned_cols=112 Identities=15% Similarity=0.118 Sum_probs=57.5
Q ss_pred CCCHHHHHHH-------CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 0948999982-------768887998488899679999999999824789889566776878999999999999677521
Q 537021.9.peg.4 19 QTKSEQLLAS-------DPTRSAWVSANAGSGKTHILVQRVLRLLLANAHPSTLLCLTHTKAAAAEMSHRVLEIITAWSH 91 (242)
Q Consensus 19 ~~~~qq~~a~-------~~~~~~lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~lTFT~kAA~El~~RI~~~l~~~~~ 91 (242)
T Consensus 10 P~GDQP~AI~~L~~~l~~G~~~QtLLGvTGsGKTFT~AnVIa~~-~rP-----TLV~aHNKTLAAQLY~EfKefFPeNAV 83 (667)
T TIGR00631 10 PAGDQPKAIAKLVEGLEAGEKEQTLLGVTGSGKTFTMANVIAQV-QRP-----TLVLAHNKTLAAQLYNEFKEFFPENAV 83 (667)
T ss_pred CCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHH-CCC-----EEEECCCHHHHHHHHHHHHHHCCCCCE
T ss_conf 67881899999999985688714785321486278898999984-798-----499857776799999999863867724
Q ss_pred CCCCCCHHH--HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 674221464--997314799978999999999999831001321117999987
Q 537021.9.peg.4 92 LSDEILSAE--ITKIQGKKPNKSDMSKARHLLITILETPGGLKVQTIHAFCEA 142 (242)
Q Consensus 92 ~~~~~~~~~--l~~~~~~~~~~~~~~~~~~ll~~~l~~~~~~~i~Ti~~f~~~ 142 (242)
T Consensus 84 EYFvSYYDYYQPEAYvP~~D--tyIEKda----SINdeIerlR~SAT~SLl~R 130 (667)
T TIGR00631 84 EYFVSYYDYYQPEAYVPSKD--TYIEKDA----SINDEIERLRLSATKSLLER 130 (667)
T ss_pred EEEEECCCCCCCCCCCCCCC--CEEECCC----CHHHHHHHHHHHHHHHHCCC
T ss_conf 52552032378732147988--4130455----30046767788988864237