HHsearch alignment for GI: peg_409 and conserved domain: TIGR02538

>TIGR02538 type_IV_pilB type IV-A pilus assembly ATPase PilB; InterPro: IPR013374 This model describes a protein involved in type IV pilus biogenesis designated PilB in Pseudomonas aeruginosa but PilF in Neisseria gonorrhoeae; the more common usage, reflected here, is PilB. This protein is an ATPase involved in protein export for pilin assembly, and is closely related to GspE (IPR013369 from INTERPRO) of type II secretion systems (also referred to as the main terminal branch of the general secretion pathway). Note that type IV pilus systems are often divided into type IV-A and IV-B, with the latter group including bundle-forming pilus, mannose-sensitive hemagglutinin, etc. Members of this family are found in type IV-A systems.; GO: 0005524 ATP binding, 0008565 protein transporter activity, 0009297 pilus biogenesis.
Probab=90.42  E-value=0.24  Score=29.27  Aligned_cols=26  Identities=38%  Similarity=0.517  Sum_probs=19.3

Q ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf             688879984888996799999999998
Q 537021.9.peg.4   30 PTRSAWVSANAGSGKTHILVQRVLRLL   56 (242)
Q Consensus        30 ~~~~~lV~A~aGSGKT~tL~~rv~~ll   56 (242)
T Consensus       325 PqGMvLVTGPTGSGKTVSL-YTaLniL  350 (577)
T TIGR02538       325 PQGMVLVTGPTGSGKTVSL-YTALNIL  350 (577)
T ss_pred             CCCCEEEECCCCCCHHHHH-HHHHCCC
T ss_conf             9972886266598416878-7631125