HHsearch alignment for GI: peg_409 and conserved domain: TIGR02788

>TIGR02788 VirB11 P-type DNA transfer ATPase VirB11; InterPro: IPR014155 This entry contains VirB11, a protein that is found in the vir locus of Agrobacterium Ti plasmids where it is involved in the type IV secretion system for DNA transfer . VirB11 is believed to be an ATPase and is a homologue of the P-like conjugation system TrbB protein and the Flp pilus system protein TadA ..
Probab=95.77  E-value=0.0077  Score=39.73  Aligned_cols=44  Identities=25%  Similarity=0.434  Sum_probs=28.4

Q ss_pred             HHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf             998276888799848889967999999999982478988956677687
Q 537021.9.peg.4   25 LLASDPTRSAWVSANAGSGKTHILVQRVLRLLLANAHPSTLLCLTHTK   72 (242)
Q Consensus        25 ~~a~~~~~~~lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~lTFT~   72 (242)
T Consensus       152 ~~Ai~~~knIii~GGTgSGKTTf~-kal~~~IP~~---ER~iTIED~~  195 (328)
T TIGR02788       152 RLAIASRKNIIISGGTGSGKTTFL-KALVKEIPKD---ERLITIEDTR  195 (328)
T ss_pred             HHHHHCCCEEEEEECCCCHHHHHH-HHHHHCCCCC---CCEEEEEEEE
T ss_conf             999873891999906897189999-9997327622---5278885201