HHsearch alignment for GI: peg_409 and conserved domain: cd01120
>cd01120 RecA-like_NTPases RecA-like NTPases. This family includes the NTP binding domain of F1 and V1 H+ATPases, DnaB and related helicases as well as bacterial RecA and related eukaryotic and archaeal recombinases. This group also includes bacterial conjugation proteins and related DNA transfer proteins involved in type II and type IV secretion.
Probab=94.15 E-value=0.06 Score=33.43 Aligned_cols=46 Identities=22% Similarity=0.362 Sum_probs=31.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 79984888996799999999998247898895667768789999999999
Q 537021.9.peg.4 34 AWVSANAGSGKTHILVQRVLRLLLANAHPSTLLCLTHTKAAAAEMSHRVL 83 (242)
Q Consensus 34 ~lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~lTFT~kAA~El~~RI~ 83 (242)
T Consensus 2 ~li~g~~g~GKttl~~~~~~~~~~~~---~~~~~~~~ee-~~~q~~~~~~ 47 (165)
T cd01120 2 ILVFGPTGSGKTTLALQLALNIATKG---GKVVYVDIEE-EIEELTERLI 47 (165)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCC---CEEEEEECCC-CHHHHHHHHH
T ss_conf 89998999989999999999987639---9799998666-4489999999