HHsearch alignment for GI: peg_409 and conserved domain: cd01123

>cd01123 Rad51_DMC1_radA Rad51_DMC1_radA,B. This group of recombinases includes the eukaryotic proteins RAD51, RAD55/57 and the meiosis-specific protein DMC1, and the archaeal proteins radA and radB. They are closely related to the bacterial RecA group. Rad51 proteins catalyze a similiar recombination reaction as RecA, using ATP-dependent DNA binding activity and a DNA-dependent ATPase. However, this reaction is less efficient and requires accessory proteins such as RAD55/57 .
Probab=91.95  E-value=0.6  Score=26.43  Aligned_cols=26  Identities=31%  Similarity=0.298  Sum_probs=19.1

Q ss_pred             CCCCE-EEEECCCCCHHHHHHHHHHHH
Q ss_conf             68887-998488899679999999999
Q 537021.9.peg.4   30 PTRSA-WVSANAGSGKTHILVQRVLRL   55 (242)
Q Consensus        30 ~~~~~-lV~A~aGSGKT~tL~~rv~~l   55 (242)
T Consensus        17 ~~G~itEi~G~~GsGKTql~lqla~~~   43 (235)
T cd01123          17 ETGSITEIFGEFGSGKTQLCHQLAVTV   43 (235)
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf             478799999999984999999999998