HHsearch alignment for GI: peg_409 and conserved domain: cd01129
>cd01129 PulE-GspE PulE/GspE The type II secretory pathway is the main terminal branch of the general secretory pathway (GSP). It is responsible for the export the majority of Gram-negative bacterial exoenzymes and toxins. PulE is a cytoplasmic protein of the GSP, which contains an ATP binding site and a tetracysteine motif. This subgroup also includes PillB and HofB.
Probab=95.41 E-value=0.022 Score=36.49 Aligned_cols=28 Identities=32% Similarity=0.425 Sum_probs=22.4
Q ss_pred HCCCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2768887998488899679999999999
Q 537021.9.peg.4 28 SDPTRSAWVSANAGSGKTHILVQRVLRL 55 (242)
Q Consensus 28 ~~~~~~~lV~A~aGSGKT~tL~~rv~~l 55 (242)
T Consensus 77 ~~~~GlilitGptGSGKtTtl~a~l~~~ 104 (264)
T cd01129 77 EKPHGIILVTGPTGSGKTTTLYSALSEL 104 (264)
T ss_pred HCCCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 0899889997899997799999999864