HHsearch alignment for GI: peg_409 and conserved domain: pfam06745

>pfam06745 KaiC KaiC. This family represents a conserved region within bacterial and archaeal proteins, most of which are hypothetical. More than one copy is sometimes found in each protein. This family includes KaiC, which is one of the Kai proteins among which direct protein-protein association may be a critical process in the generation of circadian rhythms in cyanobacteria.
Probab=95.37  E-value=0.012  Score=38.42  Aligned_cols=51  Identities=16%  Similarity=0.220  Sum_probs=35.3

Q ss_pred             CCCC-EEEEECCCCCHHHHHHHHHHH-HHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             6888-799848889967999999999-982478988956677687899999999999
Q 537021.9.peg.4   30 PTRS-AWVSANAGSGKTHILVQRVLR-LLLANAHPSTLLCLTHTKAAAAEMSHRVLE   84 (242)
Q Consensus        30 ~~~~-~lV~A~aGSGKT~tL~~rv~~-ll~~g~~P~~IL~lTFT~kAA~El~~RI~~   84 (242)
T Consensus        17 ~~gs~~LI~G~pGsGKT~la~qfl~~ga~~~g---e~~lYis~ee~-~~~l~~~~~~   69 (231)
T pfam06745        17 PEGRVVLITGGPGTGKTIFGLQFLYNGALEYG---EPGVYVTLEEP-PEDLRENAKS   69 (231)
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHHCC---CCEEEEEECCC-HHHHHHHHHH
T ss_conf             29969999858972599999999999998658---96899981379-9999999998