HHsearch alignment for GI: peg_409 and conserved domain: pfam10236

>pfam10236 DAP3 Mitochondrial ribosomal death-associated protein 3. This is a family of conserved proteins which were originally described as death-associated-protein-3 (DAP-3). The proteins carry a P-loop DNA-binding motif, and induce apoptosis. DAP3 has been shown to be a pro-apoptotic factor in the mitochondrial matrix and to be crucial for mitochondrial biogenesis and so has also been designated as MRP-S29 (mitochondrial ribosomal protein subunit 29).
Probab=92.99  E-value=0.14  Score=30.90  Aligned_cols=32  Identities=25%  Similarity=0.278  Sum_probs=27.4

Q ss_pred             HCCCCCEEEEECCCCCHHHHHHHHHHHHHHCC
Q ss_conf             27688879984888996799999999998247
Q 537021.9.peg.4   28 SDPTRSAWVSANAGSGKTHILVQRVLRLLLAN   59 (242)
Q Consensus        28 ~~~~~~~lV~A~aGSGKT~tL~~rv~~ll~~g   59 (242)
T Consensus        20 ~~~~~r~vL~G~~GsGKS~~L~q~v~~A~~~~   51 (274)
T pfam10236        20 SKKVVRFVLTGERGSGKSVLLAQAMAYALTQG   51 (274)
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCC
T ss_conf             79951899889799779999999999998599