HHsearch alignment for GI: peg_410 and conserved domain: COG3893
>COG3893 Inactivated superfamily I helicase [DNA replication, recombination, and repair].
Probab=98.17 E-value=0.00074 Score=44.43 Aligned_cols=306 Identities=15% Similarity=0.195 Sum_probs=146.6
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHH
Q ss_conf 99999999999983586221254368782446898615310122489999987416973660486211233105226876
Q 537021.9.peg.4 345 LARRIAYTISNMIGTDTIFSNGKKRVIQAKDILVLVRKRKDTPLITFLTRFLKNDYKISVVGNDRFILTDHLAIKDLMAL 424 (952)
Q Consensus 345 ~a~~i~~~I~~l~~~~~~~~~~~~r~~~~~diaVL~r~~~~~~~~~~~l~al~~~~~ip~~~~~~~~~~~~~~v~~l~a~ 424 (952)
T Consensus 317 ea~aiA~alr~aLe~~-------------~~aALVt~Dr~lARRV----~~~L~R~gv~adds~G~pLs~t~~aal~~~~ 379 (697)
T COG3893 317 EAYAIALALREALEAP-------------RTAALVTPDRNLARRV----ATELARFGVEADDSAGTPLSATPQAALLMLL 379 (697)
T ss_pred HHHHHHHHHHHHHHCC-------------CCCCCCCCCHHHHHHH----HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 6799999999998483-------------3000016743789999----9999870877665568754322777999999
Q ss_pred HHHHHCCCCCHHHHHHCCCCCCCC--CHH------HHHHHHHHCCCCCCH-H----HHHHHH----HHH-HHHHH-----
Q ss_conf 888748131102454305877478--888------999987301268657-8----887643----111-15899-----
Q 537021.9.peg.4 425 GRFILSQEDDLSFVCMLKSPLFNF--SED------DIFKICTQRHETETV-Y----EYIQKF----ANC-GISKF----- 481 (952)
Q Consensus 425 l~~l~~p~~~~~~~~~L~spl~g~--~~~------~l~~l~~~~~~~~~~-~----~~~~~~----~~~-~~~~~----- 481 (952)
T Consensus 380 ie~v~rpgDPv~Ll~llKhPl~~fg~e~~~~~~aa~~LEl~alrg~~~s~~~~~L~~lle~rl~~~~d~~~~p~~~~~~~ 459 (697)
T COG3893 380 IEAVLRPGDPVALLALLKHPLARFGLEFLDLRDAANVLELAALRGGKVSPGYGELPALLEARLLGTSDDDLPPAWRAGLD 459 (697)
T ss_pred HHHHHCCCCHHHHHHHHHCCHHHCCCCHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCC
T ss_conf 99980799769899997094120477123210757778899860788883166799999998512466667852020369
Q ss_pred ---HHHHHHHHHHHHHH-------HCCCHHHHHHHHHHHCCHHHHH--------HHCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf ---99999999999864-------2199899999998503469999--------81135238999999999999985205
Q 537021.9.peg.4 482 ---QHVIKYIHELIHIA-------QFCSPHDFFTLILGAKKGRQQF--------ISRFGNEVIDVLDEFLNFTLRNEQNS 543 (952)
Q Consensus 482 ---~~~~~~l~~~~~~~-------~~~~~~~~~~~~l~~~~~~~~~--------~~~~~~~~~~~l~~l~~~a~~~e~~~ 543 (952)
T Consensus 460 ~~~i~lA~~L~~~i~~A~~pl~~~~~~~~~~l~~~a~~t~~ale~l~~dd~g~l~~lw~~eage~L~~l~~gl~--~~~a 537 (697)
T COG3893 460 PDNIALARLLLQRISEAKAPLGAGHFEAIADLLALALDTVRALENLAIDDEGYLLALWLGEAGEKLAALLRGLI--EAGA 537 (697)
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH--HCCC
T ss_conf 42479999999998864356323227777639999999999998625662103999987505579999999998--6146
Q ss_pred CCCHHHHHHHHHHCCCCCCCC-CCCCCCCCEEECHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 689899999885010013211-2357885303001221456777799815887767765444222344555666631235
Q 537021.9.peg.4 544 YSSLQELISELEQYPPTIKRA-HSANHNEVRIMTVHTAKGLESPVVFLVDTGSQVFSHKHIKKMHIMPSLNDDPGIPIWI 622 (952)
Q Consensus 544 ~~~l~~f~~~l~~~~~~~~~~-~~~~~d~V~imTiH~SKGLEfpvV~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (952)
T Consensus 538 ~ls~~ew~diLd~L~~ge~vkp~~~~hprv~I~gaLEaRl~~~D~VVi~glNEg~wP~~~~nd~FlSr~mr~~lgL~p-- 615 (697)
T COG3893 538 QLSAPEWPDILDALVAGETVKPAPGTHPRVRIMGALEARLQRFDGVVIVGLNEGVWPSKTPNDLFLSRPMRKSLGLPP-- 615 (697)
T ss_pred CCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHCHHHHHHCCCCC--
T ss_conf 567305789999861776236788888716883104665600352899557756488999651233458897459989--
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCC
Q ss_conf 44457874779999999764444678878751146652899983167777666543210688731035
Q 537021.9.peg.4 623 PQSKSRNNIVSDLIKHLKKSTQEEYNRLLYVGMTRASDQLIICKHSNTSNEKKSNQRTWYDMVYDSFH 690 (952)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~Ee~RLlYVAlTRAk~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (952)
T Consensus 616 -------p-erR~glq----------Ahd~fqma~na~eVvLt~~~r~g-~ap~v~SrwLeRL~~l~~ 664 (697)
T COG3893 616 -------P-ERRIGLQ----------AHDYFQMAKNAPEVVLTRSERSG-EAPAVSSRWLERLLTLLG 664 (697)
T ss_pred -------H-HHHHHHH----------HHHHHHHHCCCCCEEEEEHHCCC-CCCCHHHHHHHHHHHHHH
T ss_conf -------6-7875466----------64899996599817986320158-986045689999999850