HHsearch alignment for GI: peg_410 and conserved domain: PRK10875
>PRK10875 recD exonuclease V subunit alpha; Provisional.
Probab=98.46 E-value=1.2e-07 Score=71.92 Aligned_cols=53 Identities=25% Similarity=0.310 Sum_probs=39.6
Q ss_pred CCCEEECHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 85303001221456777799815887767765444222344555666631235444578747799999997644446788
Q 537021.9.peg.4 570 NEVRIMTVHTAKGLESPVVFLVDTGSQVFSHKHIKKMHIMPSLNDDPGIPIWIPQSKSRNNIVSDLIKHLKKSTQEEYNR 649 (952)
Q Consensus 570 d~V~imTiH~SKGLEfpvV~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ee~R 649 (952)
T Consensus 529 e~AYAmTVHKSQGSEF~~V~lvL------P~~~s~l----------------------------------------LtRe 562 (607)
T PRK10875 529 ETAWAMTVHKSQGSEFDHAALIL------PSQRTPV----------------------------------------VTRE 562 (607)
T ss_pred CEEEEEEEECCCCCCCCCEEEEE------CCCCCCC----------------------------------------CCHH
T ss_conf 77988555535211779679990------5876752----------------------------------------5298
Q ss_pred HHHHHCCCCCCEEEEEECC
Q ss_conf 7875114665289998316
Q 537021.9.peg.4 650 LLYVGMTRASDQLIICKHS 668 (952)
Q Consensus 650 LlYVAlTRAk~~L~l~~~~ 668 (952)
T Consensus 563 LlYTAITRAk~~l~lvg~~ 581 (607)
T PRK10875 563 LVYTAITRARRRLSLYADE 581 (607)
T ss_pred HHHHHHHHHHCEEEEEECH
T ss_conf 9999987665068999899