HHsearch alignment for GI: peg_410 and conserved domain: PRK11069
>PRK11069 recC exonuclease V subunit gamma; Provisional.
Probab=99.62 E-value=1.3e-09 Score=86.14 Aligned_cols=301 Identities=13% Similarity=0.124 Sum_probs=168.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHC----CCCEEECCCCCCC
Q ss_conf 333688899999999999983586221254368782446898615310122489999987416----9736604862112
Q 537021.9.peg.4 338 QESSASILARRIAYTISNMIGTDTIFSNGKKRVIQAKDILVLVRKRKDTPLITFLTRFLKNDY----KISVVGNDRFILT 413 (952)
Q Consensus 338 ~~~~~~~~a~~i~~~I~~l~~~~~~~~~~~~r~~~~~diaVL~r~~~~~~~~~~~l~al~~~~----~ip~~~~~~~~~~ 413 (952)
T Consensus 378 ~CHS~~REVEvLhD~LL~~~~~dp--------~L~PrDIlVM~PDI~---~YaP~I~AVFg~~~~~r~IP~~IaDr~~~~ 446 (1122)
T PRK11069 378 VCHSPQREVEVLHDRLLAMLEADP--------TLTPRDIIVMVADID---SYSPFIQAVFGNAPGERYLPFAISDRRARQ 446 (1122)
T ss_pred ECCCHHHHHHHHHHHHHHHHHHCC--------CCCCCCEEEECCCHH---HHHHHHHHHHCCCCCCCCCCEEEECCCHHH
T ss_conf 479859999999999999985299--------998311688769878---876899998389987886986771755212
Q ss_pred CCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCC----CCCCHHHHHHHHHHCCCC--------------------CCHHHH
Q ss_conf 33105226876888748131102454305877----478888999987301268--------------------657888
Q 537021.9.peg.4 414 DHLAIKDLMALGRFILSQEDDLSFVCMLKSPL----FNFSEDDIFKICTQRHET--------------------ETVYEY 469 (952)
Q Consensus 414 ~~~~v~~l~a~l~~l~~p~~~~~~~~~L~spl----~g~~~~~l~~l~~~~~~~--------------------~~~~~~ 469 (952)
T Consensus 447 ~~pl~~a~l~LL~L~~sRf~asevl~LL~~pav~~rF~l~~~dl~~l~~Wl~~aGiRWGlD~~~r~~~~lp~~~~nTW~~ 526 (1122)
T PRK11069 447 SHPVLQAFISLLSLPDSRFVAEDVLALLEVPALAARFDITEEGLRYLRQWVEESGIRWGLDDDNVRELELPATGQHTWRF 526 (1122)
T ss_pred CCHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHCCCEECCCHHHHHHCCCCCCCCCCHHH
T ss_conf 16999999999846456778999999971968998849999999999999998197757787779863798534351999
Q ss_pred HH-----HH---------------------HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHCCCH
Q ss_conf 76-----43---------------------11115899999999999998642199899999998503469999811352
Q 537021.9.peg.4 470 IQ-----KF---------------------ANCGISKFQHVIKYIHELIHIAQFCSPHDFFTLILGAKKGRQQFISRFGN 523 (952)
Q Consensus 470 ~~-----~~---------------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 523 (952)
T Consensus 527 GL~RlLLGyam~~~~~~~~~ilP~~~~~g~~ael~G~L~~fl~~L~~~~~~l~~~~~~~~W~~~l~~l--l~~ff~~-~~ 603 (1122)
T PRK11069 527 GLTRMLLGYAMESAAGEWQSVLPYDESSGLIAELAGHLASLLMQLNIWRRGLAQPRPLEEWLPVCRQL--LDDFFLP-DA 603 (1122)
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH--HHHHHCC-CH
T ss_conf 99999877023788776476577775565309898789999999999999975999999999999999--9998479-84
Q ss_pred HHH-------HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEECHHHCCCCCCCEEEECCCCCC
Q ss_conf 389-------9999999999998520568989999988501001321123578853030012214567777998158877
Q 537021.9.peg.4 524 EVI-------DVLDEFLNFTLRNEQNSYSSLQELISELEQYPPTIKRAHSANHNEVRIMTVHTAKGLESPVVFLVDTGSQ 596 (952)
Q Consensus 524 ~~~-------~~l~~l~~~a~~~e~~~~~~l~~f~~~l~~~~~~~~~~~~~~~d~V~imTiH~SKGLEfpvV~i~~l~~~ 596 (952)
T Consensus 604 e~~~~l~~i~~~~~~l~~~~~~a~~~~~i~l~vv~~~L~~~L~~~~~~~~Fl~G~VtFctl~PMRsIPfkvVcLLGmndg 683 (1122)
T PRK11069 604 ETEAALTLIEQQWQALIEEGLDAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNFCTLMPMRSIPFKVVCLLGMNDG 683 (1122)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCC
T ss_conf 15899999999999999999846888746599999999998516564456578975882576456887122889689867
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
Q ss_conf 677654442223445556666312354445787477999999976444467887875114665289998316777766
Q 537021.9.peg.4 597 VFSHKHIKKMHIMPSLNDDPGIPIWIPQSKSRNNIVSDLIKHLKKSTQEEYNRLLYVGMTRASDQLIICKHSNTSNEK 674 (952)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ee~RLlYVAlTRAk~~L~l~~~~~~~~~~ 674 (952)
T Consensus 684 ~fPR~~~~~~FDLma~---------~pr~G-------------DRsrRddDRyLFLEaLLSAr~~LyiSyvGrsirdn 739 (1122)
T PRK11069 684 VYPRTLPPLGFDLMSQ---------KPKRG-------------DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN 739 (1122)
T ss_pred CCCCCCCCCCCCCCCC---------CCCCC-------------CCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCC
T ss_conf 7999899999873446---------76689-------------99832657999999999514317998813136888