HHsearch alignment for GI: peg_410 and conserved domain: PRK11773
>PRK11773 uvrD DNA-dependent helicase II; Provisional.
Probab=100.00 E-value=0 Score=626.00 Aligned_cols=438 Identities=24% Similarity=0.304 Sum_probs=339.5
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECHHCCCHHHHHHHHHHHHHCCCC
Q ss_conf 99999999999999998699775899999999831584248999998617989998071019999999999984100246
Q 537021.9.peg.4 127 LTLAKYLNAHYEEAKKKNCVLDFEDLIINTNDLLKKRDVSAWIRYKIDQEINHILIDEVQDTSLIQWEVIRSLTEDFFVG 206 (952)
Q Consensus 127 ~~~~~~~~~~y~~~k~~~~~ldf~Dl~~~a~~lL~~~~~~~~~~~~l~~~~~~ilVDEfQDT~~~Q~~il~~L~~~~~~~ 206 (952)
T Consensus 167 ~~~~~~iy~~Y~~~~~~~~~lDFdDll~~~~~ll~~~~~---v~~~~~~rf~~IlVDEfQDtn~~Q~~ll~~La~----- 238 (722)
T PRK11773 167 EQTWLKIYQAYQEACDRAGLVDFAELLLRAHELWLDKPH---ILQHYQERFRHILVDEFQDTNAIQYAWIRLLAG----- 238 (722)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHH---HHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHC-----
T ss_conf 999999999999999876998889999999998621999---999998539799997723599999999998617-----
Q ss_pred CCCCCCCCEEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCC
Q ss_conf 76667686499996665676542488847899999996652134576531200686668878999999999711210012
Q 537021.9.peg.4 207 KNTHSSPRTLFAVGDEKQSIYSFHGAEPKRVLREKRINQKRATNAGQKFSIIELPLSFRSTADILTVVDKVFSIPENAQG 286 (952)
Q Consensus 207 ~~~~~~~~~l~~VGD~kQSIY~FRGAd~~~~~~~~~~f~~~~~~~~~~~~~~~L~~N~RS~~~Ii~~~N~~f~~~~~~~~ 286 (952)
T Consensus 239 -----~~~nl~vVGD~dQSIY~FRGA~~~~i~~f~~~f~~--------~~~i~L~~NyRSt~~Il~~an~li~~n~~r~~ 305 (722)
T PRK11773 239 -----DTGNVMIVGDDDQSIYGWRGAQVENIQRFLKDFPG--------AETIRLEQNYRSTANILKAANALIANNSGRLG 305 (722)
T ss_pred -----CCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHCCC--------CEEEECCCCCCCCHHHHHHHHHHHHHCCCCCC
T ss_conf -----89728999674021133305636789999874477--------62786144416665799999999863245555
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 33221222122334478887436511344432233431011111000111333368889999999999998358622125
Q 537021.9.peg.4 287 LSEDSTTTIRHRSSRIGQVGTVQLWEQVVSQHDSQCNPQQESWTSYFDSLPQESSASILARRIAYTISNMIGTDTIFSNG 366 (952)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~I~~l~~~~~~~~~~ 366 (952)
T Consensus 306 k~l~~---------~~~~g~~i~~~~--------------------------~~~~~~Ea~~Ia~~I~~~~~~g------ 344 (722)
T PRK11773 306 KELWT---------DGGDGEPISLYC--------------------------AFNELDEARFVVERIKQWQDNG------ 344 (722)
T ss_pred CCCCC---------CCCCCCCEEEEE--------------------------CCCHHHHHHHHHHHHHHHHHCC------
T ss_conf 50024---------577898605880--------------------------6997899999999999998738------
Q ss_pred CCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCC
Q ss_conf 43687824468986153101224899999874169736604862112331052268768887481311024543058774
Q 537021.9.peg.4 367 KKRVIQAKDILVLVRKRKDTPLITFLTRFLKNDYKISVVGNDRFILTDHLAIKDLMALGRFILSQEDDLSFVCMLKSPLF 446 (952)
Q Consensus 367 ~~r~~~~~diaVL~r~~~~~~~~~~~l~al~~~~~ip~~~~~~~~~~~~~~v~~l~a~l~~l~~p~~~~~~~~~L~spl~ 446 (952)
T Consensus 345 ----~~~~diAIL~Rtn~~~~~le~aL----~~~gIPy~i~gg~~f~~r~eikd~la~Lrl~~np~d~~al~ril~~P~r 416 (722)
T PRK11773 345 ----GALSDCAILYRSNAQSRVLEEAL----LQAGIPYRIYGGMRFFERQEIKDALAYLRLIANRNDDAAFERVVNTPTR 416 (722)
T ss_pred ----CCCCCEEEEEECCHHHHHHHHHH----HHCCCCEEEECCCCHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC
T ss_conf ----98101257751216467899999----8659984874671011359999999998763485434999999828445
Q ss_pred CCCHHHHHHHHHH-CCCCCCHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHH
Q ss_conf 7888899998730-1268657888764311------11589999999999999864219989999999850346999981
Q 537021.9.peg.4 447 NFSEDDIFKICTQ-RHETETVYEYIQKFAN------CGISKFQHVIKYIHELIHIAQFCSPHDFFTLILGAKKGRQQFIS 519 (952)
Q Consensus 447 g~~~~~l~~l~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 519 (952)
T Consensus 417 gig~~~l~~l~~~a~~~~~sl~~~~~~~~~~~~l~~~~~~~l~~f~~li~~l~~~~~~~~l~~~~~~i~~~~gl~~~~~~ 496 (722)
T PRK11773 417 GIGDRTLDVVRQTARDRQLTLWQACRALLQEKVLAGRAASALQRFIELIDALAQETADMPLHEQTDRVIKDSGLRAMYEQ 496 (722)
T ss_pred CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHH
T ss_conf 88976899999999973998999999987546568889999999999999999875149999999999996578999973
Q ss_pred CC---CHHHHHHHHHHHHHHHHHHHC----CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEECHHHCCCCCCCEEEECC
Q ss_conf 13---523899999999999998520----56898999998850100132112357885303001221456777799815
Q 537021.9.peg.4 520 RF---GNEVIDVLDEFLNFTLRNEQN----SYSSLQELISELEQYPPTIKRAHSANHNEVRIMTVHTAKGLESPVVFLVD 592 (952)
Q Consensus 520 ~~---~~~~~~~l~~l~~~a~~~e~~----~~~~l~~f~~~l~~~~~~~~~~~~~~~d~V~imTiH~SKGLEfpvV~i~~ 592 (952)
T Consensus 497 ~~~~~~~~r~~nl~el~~~~~~f~~~~~~~~~~~L~~fL~~~~l~~~~--~~~~~~~d~V~LmTiH~AKGLEFp~Vfl~g 574 (722)
T PRK11773 497 EKGEKGQARIENLEELVTATRQFEYPDEDEDLTPLQAFLSHAALEAGE--GQADAHEDAVQLMTLHSAKGLEFPLVFLVG 574 (722)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC--CCCCCCCCEEEEEEEECCCCCCCCEEEEEC
T ss_conf 146537999999999999999986402334426799999999863376--434567882899961202686677689806
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC
Q ss_conf 887767765444222344555666631235444578747799999997644446788787511466528999831677
Q 537021.9.peg.4 593 TGSQVFSHKHIKKMHIMPSLNDDPGIPIWIPQSKSRNNIVSDLIKHLKKSTQEEYNRLLYVGMTRASDQLIICKHSNT 670 (952)
Q Consensus 593 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ee~RLlYVAlTRAk~~L~l~~~~~~ 670 (952)
T Consensus 575 l~eg~fP~~~s~~----------------------------------~~~~leEERRLfYVaiTRAk~~L~ls~~~~r 618 (722)
T PRK11773 575 MEEGLFPSQMSLE----------------------------------EGGRLEEERRLAYVGITRAMQKLTLTYAESR 618 (722)
T ss_pred CCCCCCCCCCCCC----------------------------------CCCCHHHHHHHHHHHHHHHHHHEEEEECCHH
T ss_conf 6179888633468----------------------------------9751089999999989887452488551254