HHsearch alignment for GI: peg_410 and conserved domain: PRK13909
>PRK13909 putative recombination protein RecB; Provisional.
Probab=100.00 E-value=0 Score=743.11 Aligned_cols=639 Identities=21% Similarity=0.294 Sum_probs=425.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECHHCCCHHHHHHHHHHH
Q ss_conf 76689999999999999999998699775899999999831584248999998617989998071019999999999984
Q 537021.9.peg.4 121 KSTLASLTLAKYLNAHYEEAKKKNCVLDFEDLIINTNDLLKKRDVSAWIRYKIDQEINHILIDEVQDTSLIQWEVIRSLT 200 (952)
Q Consensus 121 ~~~~~l~~~~~~~~~~y~~~k~~~~~ldf~Dl~~~a~~lL~~~~~~~~~~~~l~~~~~~ilVDEfQDT~~~Q~~il~~L~ 200 (952)
T Consensus 270 ~~~~~l~~~~~~~~~~~~~~~~~~~~ldf~Dl~~~~~~lL~~~~~~~~l~~rl~~~~~~ilVDEFQDTn~~Q~~il~~L~ 349 (911)
T PRK13909 270 YKLKKLFKFLQLYKEAKNELIKKKNALDFDDISKKVYELLYESIDKDFLYFRLDSKISHILIDEFQDTSLLQYKILLPLI 349 (911)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEHHCCCCHHHHHHHHHHH
T ss_conf 99999999999999999999999489688999999999974596268999998605768996400248999999999999
Q ss_pred HHCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHC
Q ss_conf 10024676667686499996665676542488847899999996652134576531200686668878999999999711
Q 537021.9.peg.4 201 EDFFVGKNTHSSPRTLFAVGDEKQSIYSFHGAEPKRVLREKRINQKRATNAGQKFSIIELPLSFRSTADILTVVDKVFSI 280 (952)
Q Consensus 201 ~~~~~~~~~~~~~~~l~~VGD~kQSIY~FRGAd~~~~~~~~~~f~~~~~~~~~~~~~~~L~~N~RS~~~Ii~~~N~~f~~ 280 (952)
T Consensus 350 ~~~~~g~~~~-~~~~lf~VGD~KQSIY~FRgAd~~lf~~~~~~~~~---------~~~~L~~NyRS~~~Iv~~~N~~F~~ 419 (911)
T PRK13909 350 DEIKSGEGQS-KNRSFFYVGDVKQSIYRFRGGKKELFDSVAKDFSQ---------IIDNLDTNYRSSPLIVNFVNEVFKE 419 (911)
T ss_pred HHHHCCCCCC-CCCCEEEECCCCCCHHHCCCCCHHHHHHHHHHHHH---------HHCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 8762355567-88727997377311022078895999999986016---------4302352679968999999999987
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 21001233221222122334478887436511344432233431011111000111333368889999999999998358
Q 537021.9.peg.4 281 PENAQGLSEDSTTTIRHRSSRIGQVGTVQLWEQVVSQHDSQCNPQQESWTSYFDSLPQESSASILARRIAYTISNMIGTD 360 (952)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~I~~l~~~~ 360 (952)
T Consensus 420 ~~~~~~---------~~~~~~~~~~g~v~v~~---------------------------~~~~~~~~~i~~~i~~l~~~g 463 (911)
T PRK13909 420 KYKNYP---------KQFQNEHKSGGYVRVVE---------------------------SEDDELLEQLVQQAQFLLEHG 463 (911)
T ss_pred HHHCCC---------CCCCCCCCCCCEEEEEC---------------------------CCCHHHHHHHHHHHHHHHHCC
T ss_conf 532346---------32355457898178866---------------------------886899999999999999779
Q ss_pred CCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 62212543687824468986153101224899999874169736604862112331052268768887481311024543
Q 537021.9.peg.4 361 TIFSNGKKRVIQAKDILVLVRKRKDTPLITFLTRFLKNDYKISVVGNDRFILTDHLAIKDLMALGRFILSQEDDLSFVCM 440 (952)
Q Consensus 361 ~~~~~~~~r~~~~~diaVL~r~~~~~~~~~~~l~al~~~~~ip~~~~~~~~~~~~~~v~~l~a~l~~l~~p~~~~~~~~~ 440 (952)
T Consensus 464 ----------~~~~DiaILvR~~~~~~~i~~~L----~~~gIp~~~~~~~~l~~~~ev~~ll~~L~~~~~~~~------- 522 (911)
T PRK13909 464 ----------VDPDDIAILCWTNDDALSVKEYL----QEQGIKAVTESSALLINQAEVKAILEALKYCLFGEE------- 522 (911)
T ss_pred ----------CCCCCEEEEEECCCCHHHHHHHH----HHCCCCEEECCCCCHHCCHHHHHHHHHHHHHHCCCH-------
T ss_conf ----------88267899994564299999999----977998797352003226999999999999857883-------
Q ss_pred CCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHC
Q ss_conf 05877478888999987301268657888764311115899999999999998642199899999998503469999811
Q 537021.9.peg.4 441 LKSPLFNFSEDDIFKICTQRHETETVYEYIQKFANCGISKFQHVIKYIHELIHIAQFCSPHDFFTLILGAKKGRQQFISR 520 (952)
Q Consensus 441 L~spl~g~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 520 (952)
T Consensus 523 ----~~~~---~~~~l~~~~~~~~------------~l~~~~~~~~~~~~~~-----------------------~--~~ 558 (911)
T PRK13909 523 ----IYKH---NVLKLLGLHDDKI------------ELNTFKSAKESVFILI-----------------------K--EL 558 (911)
T ss_pred ----HHHH---HHHHHCCCCCCHH------------HHHHHHHHHHHHHHHH-----------------------H--HH
T ss_conf ----2599---9999738773246------------6776534355799999-----------------------9--85
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEECHHHCCCCCCCEEEECCCCCCCCCC
Q ss_conf 35238999999999999985205689899999885010013211235788530300122145677779981588776776
Q 537021.9.peg.4 521 FGNEVIDVLDEFLNFTLRNEQNSYSSLQELISELEQYPPTIKRAHSANHNEVRIMTVHTAKGLESPVVFLVDTGSQVFSH 600 (952)
Q Consensus 521 ~~~~~~~~l~~l~~~a~~~e~~~~~~l~~f~~~l~~~~~~~~~~~~~~~d~V~imTiH~SKGLEfpvV~i~~l~~~~~~~ 600 (952)
T Consensus 559 ~~~~~~~~l~~l~~~~~~~~-----~~~~fl~~~~~~~~~---~~~~~~~~V~iMTIHkSKGLEFpvVil~d~~~~~~~~ 630 (911)
T PRK13909 559 KLDLNDENLLKFLELAVGYE-----DIEEFLEKLESCSKK---IASENSKGVQIMTVHKSKGLEFPHVIVCDRLGKPNSD 630 (911)
T ss_pred CCCHHHHHHHHHHHHHHCCC-----CHHHHHHHHHHCCCC---CCCCCCCCEEEEEEEECCCCCCCEEEECCCCCCCCCC
T ss_conf 84526899999999985604-----799999999826875---6677767707776320257668879963776677788
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCC
Q ss_conf 54442223445556666312354445787477999999976444467887875114665289998316777766654321
Q 537021.9.peg.4 601 KHIKKMHIMPSLNDDPGIPIWIPQSKSRNNIVSDLIKHLKKSTQEEYNRLLYVGMTRASDQLIICKHSNTSNEKKSNQRT 680 (952)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ee~RLlYVAlTRAk~~L~l~~~~~~~~~~~~~~~~ 680 (952)
T Consensus 631 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ee~RLLYVAlTRA~~~L~i~~~~~~~~~~~~~~~~ 708 (911)
T PRK13909 631 KEN--ILEEYDGIELWQIYYRIKGRENFDKDYARALEKEKAAELEEEINKLYVAFTRAKESLIVVKKDKKSVNKESKKKS 708 (911)
T ss_pred CCC--CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHEEEEECCCCCCCCCCCCHH
T ss_conf 776--310466654220002541100057899999999999866898645164340413334888456655665564044
Q ss_pred CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
Q ss_conf 06887310356433222234544443322211012235544321000122221000011245303344332334233611
Q 537021.9.peg.4 681 WYDMVYDSFHNDERVKKIKLTNSINKDEWIAYEWSTHHPENTPLEREETIKQLMDEQKIPKKLFSPIKNDINEPYILNPS 760 (952)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s 760 (952)
T Consensus 709 ~~~~l~~~~~~~------------~~--~--------~~~~~~~~~~~~-----~-----~~~~~~~~--------~~~~ 748 (911)
T PRK13909 709 AFEILDLKPCER------------GE--I--------EPVLSVKKESII-----T-----SQLIKPHA--------YGEQ 748 (911)
T ss_pred HHHHCCCCCCCC------------CC--C--------CCCCCCCCCCCC-----C-----CCCCCCCC--------CCCC
T ss_conf 655402675536------------72--1--------666687654556-----8-----54357555--------4323
Q ss_pred HCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf 10010015554446630155677999999985668996568999999985004589988999999999998629655787
Q 537021.9.peg.4 761 TIDTKGKTNLESLLSDNQTFNRGLIIHKLLQVIFTLPEHKRKNFITSYCTKNAKLWPAKEYKNLLLSITRLLENPMMTTA 840 (952)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~a~~~Gt~vH~~lE~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 840 (952)
T Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~G~~iH~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 828 (911)
T PRK13909 749 FEKIEEQEEDSEEENDLEAIYFGEALHYCLEMLYAFKEENLKVLKNLLKNKYGHFLSESDFEDLEKRLELLINNKEFQEL 828 (911)
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHH
T ss_conf 22233355554565676889899999999965865798678999999987430579989999999999999759668987
Q ss_pred HCCC-CCCCEEEEEEEECCCCCEEEEEEEEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 1777-856113788862388858999797789997998999972580138999899999889999999999999679982
Q 537021.9.peg.4 841 MSCD-SYSEVSVSGKINCPKKDIIISGRIDQISISQQNIFIFEYKTHHHVPQEIEHIPYTHIAQLSIYEKILKDSYPNKS 919 (952)
Q Consensus 841 ~~~~-~~~Ev~~e~~~~~~~~~~~i~G~IDri~~~~~~~~IiDyKT~~~~~~~~~~~~~~Y~~QL~~Y~~al~~~~p~~~ 919 (952)
T Consensus 829 ~~~~~~~~E~~~~----~--~g~--~~~ID~l~~~~~~~~IiDYKT~~~~-------~~~y~~QL~~Y~~al~~i~~~k~ 893 (911)
T PRK13909 829 IKDGKLLKEQALL----F--NGE--LKQIDLLLEKDEEYFVIDYKSSKKY-------QDKHKAQVREYKEAISEIIPKKK 893 (911)
T ss_pred HCCCCEEEEEEEE----E--CCE--ECCCEEEEEECCEEEEEECCCCCCC-------CHHHHHHHHHHHHHHHHHCCCCE
T ss_conf 1788556877786----5--880--6680489998999999973889998-------56899999999999998779994
Q ss_pred EEEEEEECCCCEEEEC
Q ss_conf 7899998559878987
Q 537021.9.peg.4 920 LVCLLIYVSEPKVFII 935 (952)
Q Consensus 920 V~~~l~y~~~~~~~~~ 935 (952)
T Consensus 894 v~~~l~yl~~~~i~~~ 909 (911)
T PRK13909 894 VRAFIIYLLEDKIEIL 909 (911)
T ss_pred EEEEEEEECCCEEEEE
T ss_conf 6899999569817998