HHsearch alignment for GI: peg_410 and conserved domain: TIGR01447

>TIGR01447 recD exodeoxyribonuclease V, alpha subunit; InterPro: IPR006344 This family describes the exodeoxyribonuclease V alpha subunit, RecD. RecD is part of a RecBCD complex. C-terminal part of the protein matches a domain found in viral RNA helicase, superfamily 1, IPR000606 from INTERPRO. ; GO: 0008854 exodeoxyribonuclease V activity, 0009338 exodeoxyribonuclease V complex.
Probab=95.58  E-value=0.029  Score=32.83  Aligned_cols=54  Identities=31%  Similarity=0.457  Sum_probs=39.1

Q ss_pred             CCCEEECHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             85303001221456777799815887767765444222344555666631235444578747799999997644446788
Q 537021.9.peg.4  570 NEVRIMTVHTAKGLESPVVFLVDTGSQVFSHKHIKKMHIMPSLNDDPGIPIWIPQSKSRNNIVSDLIKHLKKSTQEEYNR  649 (952)
Q Consensus       570 d~V~imTiH~SKGLEfpvV~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ee~R  649 (952)
T Consensus       679 et~famTvHKSQGSEf~~v~li------LP~~~S~~L----------------------------------------~~e  712 (753)
T TIGR01447       679 ETAFAMTVHKSQGSEFDHVALI------LPNEESPVL----------------------------------------TRE  712 (753)
T ss_pred             CEEEEEEEEECCCCEEEEEEEE------CCCCCCCCC----------------------------------------CHH
T ss_conf             0588998760557604035675------658988755----------------------------------------545


Q ss_pred             HHHHHCCCCCCEEEEEECCC
Q ss_conf             78751146652899983167
Q 537021.9.peg.4  650 LLYVGMTRASDQLIICKHSN  669 (952)
Q Consensus       650 LlYVAlTRAk~~L~l~~~~~  669 (952)
T Consensus       713 llYTgiTRAk~~l~v~~d~~  732 (753)
T TIGR01447       713 LLYTGITRAKKQLSVVSDKE  732 (753)
T ss_pred             HHHHHHHHHCCEEEEEECCH
T ss_conf             66653342044677876626