>TIGR02784 addA_alphas double-strand break repair helicase AddA; InterPro: IPR014151 AddAB, also called RexAB, substitutes for RecBCD in several bacterial lineages. These DNA recombination proteins act before synapse and are particularly important for DNA repair of double-stranded breaks by homologous recombination. The term AddAB is used broadly, with AddA homologues between the alphaproteobacteria and the Firmicutes, while the partner AddB proteins show no strong homology across the two groups of species..

Probab=100.00 E-value=0 Score=1271.23 Aligned_cols=928 Identities=35% Similarity=0.609 Sum_probs=850.0 Q ss_pred CCHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH-HHHHHCCCCCHHHHHHHHHHHCCCCCC Q ss_conf 9031198888998999998531557687879999999851388327999999-987414699378999999765148875 Q 537021.9.peg.4 1 LKNRFGLSLNESYELIYKDLWPLPYFQVSDINKYVSLSMETGNPTILKKAQT-LQQASQTQCIEERFSLLSSFFLTQKFT 79 (952) Q Consensus 1 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (952) T Consensus 218 l~~~lgl~~~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~d~~a~~~~l~~~~l~~~G~ 297 (1190) T TIGR02784 218 LRRALGLAPGDTAEDLLEAVWPLPGLPRLALALIAALLKSGGGSKDAAAALSQLREAAAESDPVARLDLLLRAFLTSKGE 297 (1190) T ss_pred HHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC T ss_conf 99982979998977899996037898189999999861356650479999878875068787045899999987406887 Q ss_pred CCC--CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH Q ss_conf 000--013711221137689999999998998899898778887668999999999999999999869977589999999 Q 537021.9.peg.4 80 PQK--NIITQEINKKSPDLKEKLKKSQDEFIKIRDRFNTYKMFKSTLASLTLAKYLNAHYEEAKKKNCVLDFEDLIINTN 157 (952) Q Consensus 80 ~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~y~~~k~~~~~ldf~Dl~~~a~ 157 (952) T Consensus 298 ~k~~~~~~~k~~~~~~p~l~~~~~~~~~~~~~~~~r~~~~~~~~~t~AAL~lA~~l~~~y~~~K~~rG~LDF~DLI~rt~ 377 (1190) T TIGR02784 298 PKSASAVLKKAIQKSLPDLAEALEDAASRVEALRERLRALRMAERTLAALRLAARLLQRYAALKKARGLLDFDDLIERTV 377 (1190) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH T ss_conf 66303465456565458999999999999999998999999999889999999999999999987478987677999999 Q ss_pred HHHCCCCHHHHHHHHHHCCCCEEEEECHHCCCHHHHHHHHHHHHHCCCCCCCCC-----CCCEEEEEECCHHHHHHHCCC Q ss_conf 983158424899999861798999807101999999999998410024676667-----686499996665676542488 Q 537021.9.peg.4 158 DLLKKRDVSAWIRYKIDQEINHILIDEVQDTSLIQWEVIRSLTEDFFVGKNTHS-----SPRTLFAVGDEKQSIYSFHGA 232 (952) Q Consensus 158 ~lL~~~~~~~~~~~~l~~~~~~ilVDEfQDT~~~Q~~il~~L~~~~~~~~~~~~-----~~~~l~~VGD~kQSIY~FRGA 232 (952) T Consensus 378 ~LL~r~~~g~WV~YKLD~GiDHILvDEAQDTSP~QW~iI~~LA~eFF~GegAR~~sGr~~~RTiFAVGDeKQSIYSFQGA 457 (1190) T TIGR02784 378 ALLARPSAGAWVHYKLDRGIDHILVDEAQDTSPEQWEIIQALAEEFFSGEGARSGSGREVERTIFAVGDEKQSIYSFQGA 457 (1190) T ss_pred HHCCCCCCCCCEEHCCCCCCCEEEECCHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEEECCCCCCCC T ss_conf 97088986743001017750437712200488658999999987630686402467622453268876731044545677 Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC-CCCCCCCCCCCCCCEEEE Q ss_conf 8478999999966521345765312006866688789999999997112100123322122-212233447888743651 Q 537021.9.peg.4 233 EPKRVLREKRINQKRATNAGQKFSIIELPLSFRSTADILTVVDKVFSIPENAQGLSEDSTT-TIRHRSSRIGQVGTVQLW 311 (952) Q Consensus 233 d~~~~~~~~~~f~~~~~~~~~~~~~~~L~~N~RS~~~Ii~~~N~~f~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~v~~~ 311 (952) T Consensus 458 ~P~~F~~~~~~~~~k~~~~~~~f~~~~L~~SFRST~dvL~~VD~vF~dP~~~~G~~~~~~q~~~~H~a~R~~~PG~V~LW 537 (1190) T TIGR02784 458 DPERFAEERRLFSRKVRAVGRKFEDVSLTYSFRSTPDVLAAVDLVFADPENARGLSGDSEQAAVVHEAIRDDLPGEVDLW 537 (1190) T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEC T ss_conf 55689999889999998610026773020230584899999988744821214888775552123799742898858854 Q ss_pred CCCC--CCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC-----C--CCCCCCCCCCEEEEEEC Q ss_conf 1344--4322334310111110001113333688899999999999983586221-----2--54368782446898615 Q 537021.9.peg.4 312 EQVV--SQHDSQCNPQQESWTSYFDSLPQESSASILARRIAYTISNMIGTDTIFS-----N--GKKRVIQAKDILVLVRK 382 (952) Q Consensus 312 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~I~~l~~~~~~~~-----~--~~~r~~~~~diaVL~r~ 382 (952) T Consensus 538 d~i~DY~~~~----e~~edW~~P~D~~~~~~p~~~LAerIAa~I~~w~~~g~~i~vdGe~k~~g~~R~~~pGDiLvLVRk 613 (1190) T TIGR02784 538 DLISDYKEEG----EEPEDWTDPVDELGERAPEVRLAERIAAEIRAWLDRGEIIPVDGEDKGLGRRRAVRPGDILVLVRK 613 (1190) T ss_pred CCCCCCCCCC----CCCHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEC T ss_conf 7723578788----881002044570123063048999999999997189865421587766466863355753676305 Q ss_pred CCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHCCC Q ss_conf 31012248999998741697366048621123310522687688874813110245430587747888899998730126 Q 537021.9.peg.4 383 RKDTPLITFLTRFLKNDYKISVVGNDRFILTDHLAIKDLMALGRFILSQEDDLSFVCMLKSPLFNFSEDDIFKICTQRHE 462 (952) Q Consensus 383 ~~~~~~~~~~l~al~~~~~ip~~~~~~~~~~~~~~v~~l~a~l~~l~~p~~~~~~~~~L~spl~g~~~~~l~~l~~~~~~ 462 (952) T Consensus 614 R~~l--~~al~rALK~r~~iPVAGADRL~Lt~hiAV~DL~AL~rFvL~P~DDLSLA~lLKSPLfgl~ed~LF~LA~~R~~ 691 (1190) T TIGR02784 614 RDAL--FSALIRALKRRKGIPVAGADRLKLTSHIAVKDLMALGRFVLQPEDDLSLAALLKSPLFGLDEDDLFALAAGRSG 691 (1190) T ss_pred HHHH--HHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCC T ss_conf 5779--99999999835898343044034674125899999999854898437899998156899987899999516897 Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCH-----HHHHHHCCCHHHHHHHHHHHHHHH Q ss_conf 865788876431111589999999999999864219989999999850346-----999981135238999999999999 Q 537021.9.peg.4 463 TETVYEYIQKFANCGISKFQHVIKYIHELIHIAQFCSPHDFFTLILGAKKG-----RQQFISRFGNEVIDVLDEFLNFTL 537 (952) Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~~~l~~l~~~a~ 537 (952) T Consensus 692 ~esLw~~L~~~~~e~~~~~~~~~~~L~~~~~~ad~~~pf~Fya~~L~~d~g~GrshR~klL~RLG~EA~D~lDEfL~~AL 771 (1190) T TIGR02784 692 GESLWAALRRRAAESTAEFAETLAVLDAWLSLADFLTPFEFYARLLGRDDGDGRSHRRKLLARLGAEAEDILDEFLSQAL 771 (1190) T ss_pred CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH T ss_conf 52089999985157885489999999999713471550999999866889982589999998414346689999999999 Q ss_pred HHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEECHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC--C Q ss_conf 98520568989999988501001321123578853030012214567777998158877677654442223445556--6 Q 537021.9.peg.4 538 RNEQNSYSSLQELISELEQYPPTIKRAHSANHNEVRIMTVHTAKGLESPVVFLVDTGSQVFSHKHIKKMHIMPSLND--D 615 (952) Q Consensus 538 ~~e~~~~~~l~~f~~~l~~~~~~~~~~~~~~~d~V~imTiH~SKGLEfpvV~i~~l~~~~~~~~~~~~~~~~~~~~~--~ 615 (952) T Consensus 772 ~~Er~g~PgLqaFL~~L~~~d~EiKRe~d~~r~eVRvMTVHgaKGLEAPVVfLvD~gs~~~~~~~~~~l~~~~~~g~~~~ 851 (1190) T TIGR02784 772 AYERTGLPGLQAFLSWLEAADPEIKREMDQARDEVRVMTVHGAKGLEAPVVFLVDTGSKPFASQRVPKLLATGGSGDAND 851 (1190) T ss_pred HHHHCCCCCHHHHHHHHHHCCCEEECCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCC T ss_conf 98723686068999987207948612558998878887765466566576770387723246888630121278887766 Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCC Q ss_conf 66312354445787477999999976444467887875114665289998316777766654321068873103564332 Q 537021.9.peg.4 616 PGIPIWIPQSKSRNNIVSDLIKHLKKSTQEEYNRLLYVGMTRASDQLIICKHSNTSNEKKSNQRTWYDMVYDSFHNDERV 695 (952) Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ee~RLlYVAlTRAk~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (952) T Consensus 852 ~~~~~W~~~~~~~~~~~~~a~~~~k~~~~~EyrRLLYVamTRAedrLIVcG~~~~-g~~~~~~~sWy~~V~~Ala~~~~~ 930 (1190) T TIGR02784 852 VKVPLWRPASAFDPKLSAAARERLKERAEDEYRRLLYVAMTRAEDRLIVCGYRDS-GKRESPKGSWYALVKRALAAAGIA 930 (1190) T ss_pred CCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHHCCCCCCC T ss_conf 4034206743147726899999998688754678789998999867544346755-456688765799998735457651 Q ss_pred CCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCHHCCCCCCCC Q ss_conf 2223454444332221--10122355443210001222210000112453033443323342336111001001555444 Q 537021.9.peg.4 696 KKIKLTNSINKDEWIA--YEWSTHHPENTPLEREETIKQLMDEQKIPKKLFSPIKNDINEPYILNPSTIDTKGKTNLESL 773 (952) Q Consensus 696 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~~~~~~~~ 773 (952) T Consensus 931 ~~~~~~~~~~aegWQG~~~r~~~~~~~~~~~~~~~~~~~~~~~~aLP~~~~~p~p~~~~~~rpl~PS~~~~~i~~~~~~~ 1010 (1190) T TIGR02784 931 KQTPHPAEGEAEGWQGLAWRLRFTRRDLDPVAAEEEAAQTDTLEALPAWLRAPAPAEPALPRPLAPSGLSAAIDSAEPGE 1010 (1190) T ss_pred CEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC T ss_conf 02312356787543220111234257731246776666666678885676214777778887426766653344678741 Q ss_pred CC---------------CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHH Q ss_conf 66---------------301556779999999856689965689999999850045899889999999999986296557 Q 537021.9.peg.4 774 LS---------------DNQTFNRGLIIHKLLQVIFTLPEHKRKNFITSYCTKNAKLWPAKEYKNLLLSITRLLENPMMT 838 (952) Q Consensus 774 ~~---------------~~~a~~~Gt~vH~~lE~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 838 (952) T Consensus 1011 ~~~~~llSPvl~e~~~~~~~A~~RG~~lH~LLQ~LP~~~~~~R~~aA~ryL~~~~~~w~~a~R~~l~~~v~~vL~~p~~~ 1090 (1190) T TIGR02784 1011 AVRSTLLSPVLGEKTAARAFALLRGTLLHRLLQHLPDLPPEEREDAARRYLARSAADWPEAEREKLLAAVLAVLDDPRLA 1090 (1190) T ss_pred CCHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHH T ss_conf 01001010113787657689999999999999626798867779999998741024578688999999999984160132 Q ss_pred HHHCCCCCCCEEEEEEEECCCCC-EEEEEEEEEEEEECC--EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 87177785611378886238885-899979778999799--899997258013899989999988999999999999967 Q 537021.9.peg.4 839 TAMSCDSYSEVSVSGKINCPKKD-IIISGRIDQISISQQ--NIFIFEYKTHHHVPQEIEHIPYTHIAQLSIYEKILKDSY 915 (952) Q Consensus 839 ~~~~~~~~~Ev~~e~~~~~~~~~-~~i~G~IDri~~~~~--~~~IiDyKT~~~~~~~~~~~~~~Y~~QL~~Y~~al~~~~ 915 (952) T Consensus 1091 ~~F~~~SRAEV~i~G~l~~~g~~P~avSG~IDRL~v~~~kk~V~iVDyKTNr~~P~~~~e~p~~Y~~QlA~Yr~~L~~lY 1170 (1190) T TIGR02784 1091 PVFAEGSRAEVAIMGTLKEGGKQPLAVSGQIDRLAVDEDKKRVLIVDYKTNRPVPKTAEEVPPAYLRQLALYRALLRPLY 1170 (1190) T ss_pred HCCCCCCCEEEEEEEEECCCCCCCEEECCEEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 00477773213454652358898516601688877737887899986216889888976521899999999999988658 Q ss_pred CCCCEEEEEEECCCCEEEEC Q ss_conf 99827899998559878987 Q 537021.9.peg.4 916 PNKSLVCLLIYVSEPKVFII 935 (952) Q Consensus 916 p~~~V~~~l~y~~~~~~~~~ 935 (952) T Consensus 1171 Pg~~v~a~Ll~Te~p~~~~l 1190 (1190) T TIGR02784 1171 PGRAVEAALLWTEAPKLMEL 1190 (1190) T ss_pred CCCEEEEEEEECCCCCEEEC T ss_conf 89759998886276542409

HHsearch alignment for GI: peg_410 and conserved domain: TIGR02784