>TIGR02785 addA_Gpos recombination helicase AddA; InterPro: IPR014152 AddAB, also called RexAB, substitutes for RecBCD in several bacterial lineages. These DNA recombination proteins act before synapse and are particularly important for DNA repair of double-stranded breaks by homologous recombination. The term AddAB is used broadly, with AddA homologues between the Firmicutes and the alphaproteobacteria, while the partner AddB proteins show no strong homology across the two groups of species..

Probab=100.00 E-value=0 Score=871.43 Aligned_cols=794 Identities=20% Similarity=0.231 Sum_probs=568.4 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC-----HHHHHHHHHHCCCCEEEEECHHCCCHHH Q ss_conf 88876689999999999999999998699775899999999831584-----2489999986179899980710199999 Q 537021.9.peg.4 118 KMFKSTLASLTLAKYLNAHYEEAKKKNCVLDFEDLIINTNDLLKKRD-----VSAWIRYKIDQEINHILIDEVQDTSLIQ 192 (952) Q Consensus 118 ~~~~~~~~l~~~~~~~~~~y~~~k~~~~~ldf~Dl~~~a~~lL~~~~-----~~~~~~~~l~~~~~~ilVDEfQDT~~~Q 192 (952) T Consensus 349 ~~~p~v~~l~~~~~~f~~~f~~~KR~kn~~DF~DlEH~~L~IL~~~~~~GE~~~s~~~~~YrekF~EvlVDEYQDtN~~Q 428 (1295) T TIGR02785 349 ELKPIVKELAQLVKDFIEAFGAEKREKNVLDFSDLEHYALQILSNENESGERKPSEAAEFYREKFKEVLVDEYQDTNLVQ 428 (1295) T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHH T ss_conf 02799999999999999999997653788640276899999723588887422799999986448546751434612799 Q ss_pred HHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHH Q ss_conf 99999984100246766676864999966656765424888478999999966521345765312006866688789999 Q 537021.9.peg.4 193 WEVIRSLTEDFFVGKNTHSSPRTLFAVGDEKQSIYSFHGAEPKRVLREKRINQKRATNAGQKFSIIELPLSFRSTADILT 272 (952) Q Consensus 193 ~~il~~L~~~~~~~~~~~~~~~~l~~VGD~kQSIY~FRGAd~~~~~~~~~~f~~~~~~~~~~~~~~~L~~N~RS~~~Ii~ 272 (952) T Consensus 429 E~IL~~~~~g-------~~~~gNlFMVGDVKQSIY~FRqAdP~LFl~KY~~f~~e---g~~~G~rI~L~~NFRSr~eVl~ 498 (1295) T TIGR02785 429 ESILQLLKRG-------EEEEGNLFMVGDVKQSIYRFRQADPSLFLEKYKRFAQE---GNEHGKRIDLAENFRSRKEVLD 498 (1295) T ss_pred HHHHHHHCCC-------CCCCCCEEEECCEEECCCCCCCCCHHHHHHHHCCCCCC---CCCCCCEECHHHCCCCCCHHHH T ss_conf 9999983486-------24777744434442043631025713578750121466---6678844003214787421555 Q ss_pred HHHHHHHCCCCCC--CCCCCCCCCCCCCC--CCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHH Q ss_conf 9999971121001--23322122212233--4478887436511344432233431011111000111333368889999 Q 537021.9.peg.4 273 VVDKVFSIPENAQ--GLSEDSTTTIRHRS--SRIGQVGTVQLWEQVVSQHDSQCNPQQESWTSYFDSLPQESSASILARR 348 (952) Q Consensus 273 ~~N~~f~~~~~~~--~~~~~~~~~~~~~~--~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 348 (952) T Consensus 499 ~TN~~F~~lMd~~vGeIdYD~~a~L~~G~~~Y~~~~~~~~~~~~~~~~~~~~~e~-----~~~d~~e~~i~d~~~~E~~~ 573 (1295) T TIGR02785 499 ATNYLFKQLMDEEVGEIDYDEEAQLKFGAAKYPENPDKKTELLLYEKLAIEEEEE-----EEIDEEELEILDKAQQEATV 573 (1295) T ss_pred HHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC-----CCCCCCCCHHCCCCHHHHHH T ss_conf 6538999972888886556724572268767788775024568888775431133-----45776553010451556788 Q ss_pred HHHHHHHHHHCCCCCCC---CCCCCCCCCCEEEEEECCC-CHHHHHHHHHHHHHHCCCCEEEC-CCCCCCCCCCHHHHHH Q ss_conf 99999999835862212---5436878244689861531-01224899999874169736604-8621123310522687 Q 537021.9.peg.4 349 IAYTISNMIGTDTIFSN---GKKRVIQAKDILVLVRKRK-DTPLITFLTRFLKNDYKISVVGN-DRFILTDHLAIKDLMA 423 (952) Q Consensus 349 i~~~I~~l~~~~~~~~~---~~~r~~~~~diaVL~r~~~-~~~~~~~~l~al~~~~~ip~~~~-~~~~~~~~~~v~~l~a 423 (952) T Consensus 574 ~~~~Ik~li~~~~~vYD~~~g~~R~~~Y~DIviL~rs~~k~n~~I~~~f----~~~~IPV~~nG~~~nYFq~~Ev~~ml~ 649 (1295) T TIGR02785 574 VAERIKALIKEGFKVYDKKTGEYRPVKYRDIVILTRSRGKWNLQIMEEF----KKYGIPVFVNGDAENYFQTTEVRVMLS 649 (1295) T ss_pred HHHHHHHHHHCCCCCHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHH----HHCCCCEEECCCCCCHHHHHHHHHHHH T ss_conf 9999999974686200321386266025567886789864337999999----848998797277656078899999998 Q ss_pred HHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH--------------HHHHHHHHHHHHHHH Q ss_conf 688874813110245430587747888899998730126865788876431--------------111589999999999 Q 537021.9.peg.4 424 LGRFILSQEDDLSFVCMLKSPLFNFSEDDIFKICTQRHETETVYEYIQKFA--------------NCGISKFQHVIKYIH 489 (952) Q Consensus 424 ~l~~l~~p~~~~~~~~~L~spl~g~~~~~l~~l~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~l~ 489 (952) T Consensus 650 ~L~vIDNP~QDIPLvaVLRSPIvgf~E~ELa~iRl~~~k~~~~Y~a~~~y~~~~~~~~~qkt~~~~~L~~K~~~F~~~L~ 729 (1295) T TIGR02785 650 LLRVIDNPYQDIPLVAVLRSPIVGFDEEELALIRLQNAKDSSFYEAVKSYVKAEKLASSQKTLIEDELYEKLKRFLDSLQ 729 (1295) T ss_pred HHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH T ss_conf 73121685402788998734467888888999843166664079999999602788843355204489999999999999 Q ss_pred HHHHHHHCCCHHHHHHHHHHHCCHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC-----C Q ss_conf 999864219989999999850346999981-1352389999999999999852056898999998850100132-----1 Q 537021.9.peg.4 490 ELIHIAQFCSPHDFFTLILGAKKGRQQFIS-RFGNEVIDVLDEFLNFTLRNEQNSYSSLQELISELEQYPPTIK-----R 563 (952) Q Consensus 490 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~l~~l~~~a~~~e~~~~~~l~~f~~~l~~~~~~~~-----~ 563 (952) T Consensus 730 ~wR~~a~~~~~~~LIW~iY~~t~y~dYVGGLP~GkqRQANL~aLy~RA~~YE~tsFkGLFqF~RFI~r~~e~~~Dla~a~ 809 (1295) T TIGR02785 730 KWREFARTHSISELIWKIYEDTGYLDYVGGLPNGKQRQANLYALYERARQYEKTSFKGLFQFIRFIERMQERQKDLAEAV 809 (1295) T ss_pred HHHHHHHHCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCC T ss_conf 99998742785789999985325100012688846678889999999999851257406788999999830230115642 Q ss_pred CCCCCCCCCEEECHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC------------CCCCCCCCCHH Q ss_conf 123578853030012214567777998158877677654442223445556666312------------35444578747 Q 537021.9.peg.4 564 AHSANHNEVRIMTVHTAKGLESPVVFLVDTGSQVFSHKHIKKMHIMPSLNDDPGIPI------------WIPQSKSRNNI 631 (952) Q Consensus 564 ~~~~~~d~V~imTiH~SKGLEfpvV~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~ 631 (952) T Consensus 810 ~~~e~~naVR~MTIH~SKGLEFPvVFv~gl~k~FN~~DL~~~~ll~~~~G~G~~y~dkmetGaveDhYP~~~r~~ypsL~ 889 (1295) T TIGR02785 810 AVGEAENAVRLMTIHKSKGLEFPVVFVLGLGKQFNKQDLNESYLLNRQLGLGIKYIDKMETGAVEDHYPPEERLSYPSLP 889 (1295) T ss_pred CCCCCCCEEEEEEEECCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHH T ss_conf 46887672651002076654366789715882330111201411134567517888764126513578864321357689 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCC--------- Q ss_conf 79999999764444678878751146652899983167777666543210688731035643322223454--------- Q 537021.9.peg.4 632 VSDLIKHLKKSTQEEYNRLLYVGMTRASDQLIICKHSNTSNEKKSNQRTWYDMVYDSFHNDERVKKIKLTN--------- 702 (952) Q Consensus 632 ~~~~~~~~~~~~~~Ee~RLlYVAlTRAk~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 702 (952) T Consensus 890 ~~a~k~~~~~~llsEEMRvLYVALTRAk~KLiLVG~~kD~~~~---~~kW~~~~~~~~~~L~~~~Rl~a~ns~ldwiG~a 966 (1295) T TIGR02785 890 KVAIKQKMKRELLSEEMRVLYVALTRAKEKLILVGSVKDEKKE---VKKWLKAKDVSDWVLPENDRLQARNSYLDWIGPA 966 (1295) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHCCCCCCHHHHHHEECCCCCCCCCH T ss_conf 9999999999878888899999988888654355203338889---9999998741377063132001011542020201 Q ss_pred --------------------CCCCCCC-------CCCCCCCCCCCC---CCCCCHHHHH---------HHHHHHHHHHHH Q ss_conf --------------------4443322-------211012235544---3210001222---------210000112453 Q 537021.9.peg.4 703 --------------------SINKDEW-------IAYEWSTHHPEN---TPLEREETIK---------QLMDEQKIPKKL 743 (952) Q Consensus 703 --------------------~~~~~~~-------~~~~~~~~~~~~---~~~~~~~~~~---------~~~~~~~~~~~~ 743 (952) T Consensus 967 L~rH~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~d~~~l~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~L~~ 1046 (1295) T TIGR02785 967 LARHRDLKLLLDDALVSIVDELTKDPSKFAVEVIDEDQLLAEEEEEKVDEKSEQLEALADKNQSDTDKEFREKVRERLSY 1046 (1295) T ss_pred HEECCCHHHCCCCCCCCCHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHC T ss_conf 01136544202101157602206775304889876602110245653034056889998631477558999999997502 Q ss_pred CCCCCCCCCCCCCCCHHHCCHHCCCC--------------------------------CCCCC---CCCHHHHHHHHHHH Q ss_conf 03344332334233611100100155--------------------------------54446---63015567799999 Q 537021.9.peg.4 744 FSPIKNDINEPYILNPSTIDTKGKTN--------------------------------LESLL---SDNQTFNRGLIIHK 788 (952) Q Consensus 744 ~~~~~~~~~~~~~l~~s~~~~~~~~~--------------------------------~~~~~---~~~~a~~~Gt~vH~ 788 (952) T Consensus 1047 ~YP~~~at~~~a~QSVSEIKR~~~DPd~~~~~kie~~e~~~~~~~~~~~~R~~~~~~~~P~Fl~k~k~~~~AEiGtAtH~ 1126 (1295) T TIGR02785 1047 DYPFKAATETPAKQSVSEIKRIFEDPDEELINKIEEAEDEGSERASVKQSRGLKISLEKPKFLTKTKGLTAAEIGTATHL 1126 (1295) T ss_pred CCCCHHHCCCCCCCCHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCHHHCCCCCCCCHHHHHHHH T ss_conf 05313441546655522321347878715541132047641111222100221001068742310368986326889999 Q ss_pred HHHHCCCC-C---HHHHHHHHHHHHHHHCCCCCHHHHHHH-HHHHHHHHCCHHHHHHHCCC-CCCCEEEEEEEE------ Q ss_conf 99856689-9---656899999998500458998899999-99999986296557871777-856113788862------ Q 537021.9.peg.4 789 LLQVIFTL-P---EHKRKNFITSYCTKNAKLWPAKEYKNL-LLSITRLLENPMMTTAMSCD-SYSEVSVSGKIN------ 856 (952) Q Consensus 789 ~lE~l~~~-~---~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~-~~~Ev~~e~~~~------ 856 (952) T Consensus 1127 vmQ~~DL~ek~~s~~~~~~~i~~lv~~--~~l~~~~~~~i~~d~I~~Ffdt~LG~~~l~a~~~~~r~~f~~~L~~~~~~~ 1204 (1295) T TIGR02785 1127 VMQHLDLSEKDLSEEELQAQIERLVKK--ELLTEEVAEKINIDKIVAFFDTALGKQILKAKEVLRREPFFSMLISAEIYF 1204 (1295) T ss_pred HHHHCCCCCCCCCHHHHHHHHHHHHHH--HCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEECCCCCCCHHHHHHC T ss_conf 996367678865589999999999875--216988874442632335412578999984878624347631345889612 Q ss_pred -----CCCCCEEEEEEEEEEEEECCEEEEEECCCCCCC---C----CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE Q ss_conf -----388858999797789997998999972580138---9----9989999988999999999999967998278999 Q 537021.9.peg.4 857 -----CPKKDIIISGRIDQISISQQNIFIFEYKTHHHV---P----QEIEHIPYTHIAQLSIYEKILKDSYPNKSLVCLL 924 (952) Q Consensus 857 -----~~~~~~~i~G~IDri~~~~~~~~IiDyKT~~~~---~----~~~~~~~~~Y~~QL~~Y~~al~~~~p~~~V~~~l 924 (952) T Consensus 1205 d~~~~~~e~~~lv~GiIDgy~e~ed~~~L~DYKTD~v~gkf~~~~~~~~~~lk~rY~~Q~~LY~~AL~~~~~~kV~~~yL 1284 (1295) T TIGR02785 1205 DDLDEADEEKILVQGIIDGYLESEDGLVLFDYKTDHVEGKFGSSFEGAINELKERYRGQLKLYEKALEEILKKKVKEKYL 1284 (1295) T ss_pred CCCCCCCCCEEEEEEEEEEEEEECCCEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE T ss_conf 47774356607887412222333685789872133342667887433124788888999999999999983899723367 Q ss_pred EECCCCEEEEC Q ss_conf 98559878987 Q 537021.9.peg.4 925 IYVSEPKVFII 935 (952) Q Consensus 925 ~y~~~~~~~~~ 935 (952) T Consensus 1285 yll~~~~~i~~ 1295 (1295) T TIGR02785 1285 YLLDGDVVIKV 1295 (1295) T ss_pred EECCCCEEEEC T ss_conf 88088647509

HHsearch alignment for GI: peg_410 and conserved domain: TIGR02785