HHsearch results for GI: peg_410 and protein with PDBid: 3dmn_A
>3dmn_A Putative DNA helicase; APC89291.2, lactobacillus plantarum WCFS1, structural genomics, PSI-2, midwest center for structural genomics; HET: MSE; 1.66A {Lactobacillus plantarum}
Probab=99.53 E-value=9.5e-15 Score=121.77 Aligned_cols=56 Identities=25% Similarity=0.353 Sum_probs=46.9
Q ss_pred CCCCEEECHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 88530300122145677779981588776776544422234455566663123544457874779999999764444678
Q 537021.9.peg.4 569 HNEVRIMTVHTAKGLESPVVFLVDTGSQVFSHKHIKKMHIMPSLNDDPGIPIWIPQSKSRNNIVSDLIKHLKKSTQEEYN 648 (952)
Q Consensus 569 ~d~V~imTiH~SKGLEfpvV~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ee~ 648 (952)
.+.|.+||||++||||||+|||+++.....+. .+++
T Consensus 99 ~~~I~v~Tih~~KGlEfd~Vil~~~~~~~~~~--------------------------------------------~~~~ 134 (174)
T 3dmn_A 99 APGVIVVPSFLAKGLEFDAVIVWNANQENYQR--------------------------------------------EDER 134 (174)
T ss_dssp CSSEEEEEGGGCTTCCEEEEEEETCBTTTSCS--------------------------------------------GGGH
T ss_pred CCCEEEEEEECCCCCCCCEEEEECCCCCCCCC--------------------------------------------HHHH
T ss_conf 68479986030367647999995661033468--------------------------------------------5565
Q ss_pred HHHHHHCCCCCCEEEEEECC
Q ss_conf 87875114665289998316
Q 537021.9.peg.4 649 RLLYVGMTRASDQLIICKHS 668 (952)
Q Consensus 649 RLlYVAlTRAk~~L~l~~~~ 668 (952)
||||||||||+++|+|+...
T Consensus 135 ~llYVa~TRAk~~L~i~~~~ 154 (174)
T 3dmn_A 135 QLLYTICSRAMHELTLVAVG 154 (174)
T ss_dssp HHHHHHHTTEEEEEEEEEES
T ss_pred HHHHHHHHHCCCEEEEEECC
T ss_conf 46521450100289999899