RPSBLAST alignment for GI: peg_410 and conserved domain: pfam00580
>gnl|CDD|144246 pfam00580, UvrD-helicase, UvrD/REP helicase. The Rep family helicases are composed of four structural domains. The Rep family function as dimers. REP helicases catalyse ATP dependent unwinding of double stranded DNA to single stranded DNA. Bacillus subtilis addA and Escherichia coli exodeoxyribonuclease V beta have large insertions near to the carboxy-terminus relative to other members of the family. Length = 494
Score = 132 bits (335), Expect = 4e-31
Identities = 97/450 (21%), Positives = 160/450 (35%), Gaps = 92/450 (20%)
Query: 82 KNIITQEINKKSPDLKEKLKKSQDEFIKIRDRF-----NTYKMFKSTLASLTLAKYLNAH 136
K I+ ++ L L + ++ K ++ + +T A++
Sbjct: 117 KEILKKDRLDLDSKLLRPLLELKELISKAKNELLSPEELQQASYAATPRDKLAAEFYQE- 175
Query: 137 YEEAKKKNCVLDFEDLIINTNDLLKKRDVSAWIRYKIDQEINHILIDEVQDTSLIQWEVI 196
Y+E K+N LDF+DL++ T +LL+ + + +IL+DE QDT+ IQ+E++
Sbjct: 176 YQERLKENNALDFDDLLLLTLELLRSDP---ELLEAYRERFKYILVDEFQDTNPIQYELL 232
Query: 197 RSLTEDFFVGKNTHSSPRTLFAVGDEKQSIYSFHGAEPKRVLREKRINQKRATNAGQKFS 256
+ L LF VGD QSIY F GA+ + +L+ + K A
Sbjct: 233 KLLA----------GGHPNLFLVGDPDQSIYGFRGADIENILKFE----KDFPAA----K 274
Query: 257 IIELPLSFRSTADILTVVDKVFSIPENAQGLSEDSTTTIRHRSSRIGQVGTVQLWEQVVS 316
+I L ++RST +IL +K+ I + ++R + + S
Sbjct: 275 VITLEQNYRSTPEILNAANKL-----------------ISNNTARKEK-------RLLWS 310
Query: 317 QHDSQCNPQQESWTSYFDSLPQESSASILARRIAYTISNMIGTDTIFSNGKKRVIQAKDI 376
Q S + + A IA I + I DI
Sbjct: 311 QKGSGEKVTVYEAETEQEE----------AEFIADEIKALH--------KSGAAIPFGDI 352
Query: 377 LVLVRKRKDTPLITFLTRFLKNDYKISVVGNDRFILTDHLAIKDLMALGRFILSQEDDLS 436
VLVR + I LK ++G F D IKDL+AL R I + +DDL+
Sbjct: 353 AVLVRSNSQSRAI--EEALLKAGIPYKILGGLSFF--DRKEIKDLLALLRLIDNPKDDLA 408
Query: 437 FVCMLKSPLFNFSEDDI--------------FKICTQRHETETVYEYIQKFANCGISKFQ 482
+ +L +P + FK Q E + + K
Sbjct: 409 LLRILNTPKRGIGPTTLDKLRNLAKDRQISLFKALNQLLEK-----LNELLSARAYKKLL 463
Query: 483 HVIKYIHELIHIAQFCSPHDFFTLILGAKK 512
+ I EL + +L
Sbjct: 464 LFLALIEELEKLLLEILLEALLDEVLELLG 493