RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddA 
           21,609 sequences; 6,263,737 total letters

Searching..................................................done

Query= 537021.9.peg.410_1
         (952 letters)



>gnl|CDD|31272 COG1074, RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit
            (contains helicase and exonuclease domains) [DNA
            replication, recombination, and repair].
          Length = 1139

 Score =  369 bits (949), Expect = e-102
 Identities = 200/906 (22%), Positives = 344/906 (37%), Gaps = 82/906 (9%)

Query: 68   LLSSFFLTQKFTPQKNIITQEINKKSPDLKEKLKKSQDEFIKIRDRFNTYKMFKSTLASL 127
            L   FF  +     K           P L  + ++ ++  +   +     ++     A L
Sbjct: 279  LEKIFFQKKLKKKTKEAKLLAR----PPLHAEFEEIENRILLADELL---RLAPRLRALL 331

Query: 128  TLAKYLNAHYEEAKKKNCVLDFEDLIINTNDLLKKRDVSAWIRYKIDQEINHILIDEVQD 187
             L + L   Y+  K++   LDF+DLI     LL        +   + ++  HILIDE QD
Sbjct: 332  KLLEELIERYDAEKRQRNALDFDDLIHRLAKLLTSEG--EELAESLREQYPHILIDEFQD 389

Query: 188  TSLIQWEVIRSLTEDFFVGKNTHSSPRTLFAVGDEKQSIYSFHGAEPKRVLREKRINQKR 247
            T   QW ++  L   F  G       RTLF VGD KQSIY F GA+    L      +  
Sbjct: 390  TDPQQWRILSRLFAGFKAGN------RTLFLVGDPKQSIYRFRGADIFTFLEAASSEKA- 442

Query: 248  ATNAGQKFSIIELPLSFRSTADILTVVDKVFSIPENAQGLSEDSTTTIRHRSSRIGQVGT 307
                   F+ I L  ++RST ++L  V+ +F     A     D    +    +R G  G+
Sbjct: 443  -------FARITLETNYRSTPELLNAVNALFKQAMFAYPGEIDYDP-VAELGARNGSPGS 494

Query: 308  VQLWEQVVSQHDSQCNPQQESWTSYFDSLPQESSASILARRIAYTISNMIGTDTIFSNGK 367
            V        +       +++ WT+  +   +   A + AR+IA  +  +I  + +    +
Sbjct: 495  VNGEPLPALK----FWEEEDDWTAPENEEDEREIADLEARQIAAWLRELIEGEAVLDGER 550

Query: 368  KRVIQAKDILVLVRKRKDTPLITFLTRFLKNDYKISVVGNDRFILTDHLAIKDLMALGRF 427
               I+A DI VLVR R +   I    R LK    I V  ++R  L + L  +DL+AL R 
Sbjct: 551  P--IRAGDIAVLVRSRNEAAAIE---RALKKAGIIPVYLSNRSSLFETLEAQDLLALLRA 605

Query: 428  ILSQEDDLSFVCMLKSPLFNFSEDDIFKICTQRHETETVYEYIQKFANCGISKFQHVIKY 487
            IL+ EDDL    +L+SPLF  +EDD+  +     E E ++E +++ A+  I +F+ V+  
Sbjct: 606  ILNPEDDLPLAALLRSPLFGLTEDDLAALAQDEAEWEFLWENLRQLAD--IWRFRGVLAM 663

Query: 488  IHELIHIAQFCSPHDFFTLILGAKKGRQQFISRFGNEVIDVLDEFLNFTLRNEQNSYSSL 547
               L   A+    HD     L +    ++ +   G    ++L E L   L  E      L
Sbjct: 664  WRAL---AKITPLHDLIAERLLSTNLGERDL-TNGLHAQELLQELLTRALSYEHGLLRWL 719

Query: 548  QELISELEQYPPTIKRAHSANHNEVRIMTVHTAKGLESPVVFLVDTGSQVFSHKHIKKMH 607
            +  I+ +E       R   ++ + VRIMT+H +KGLE P+VFL    S+ F+   +  + 
Sbjct: 720  ERFIALIENNDEEQARRLESDRDLVRIMTIHKSKGLEFPIVFLPFILSKRFNDSDVPLLV 779

Query: 608  IMPSLNDDPGIPIWIPQSKSRNNIVSDLIKHLKKSTQEEYNRLLYVGMTRASDQLIIC-- 665
                  D     ++               +  ++    E  RLLYV +TRA +QLI+   
Sbjct: 780  YY----DGLRFELFDDLKSYPTPESQANKELAEEEALAEELRLLYVALTRAKEQLILIGA 835

Query: 666  ----KHSNTSNEKKSNQR-------TWYDMVYDSFHNDERVKKIK--------LTNSINK 706
                + S+        QR        W  ++  +    + V + +             + 
Sbjct: 836  PSKREKSSALAPLDLGQRVQVGGTQDWEGLLAIALKLSDPVLEEEALGAKESPQPPRADL 895

Query: 707  DEWIAYEWSTHHPENTPLEREETIKQLMDEQKIPKKLFSPIKNDINEPYILNPSTIDTKG 766
             EW         P           +   D              ++  P   + +  +   
Sbjct: 896  LEWARVFRRLKEPLWRVTSFSSLQQGEQDAYPRLDARQEASVKELPRPLSESGTPHEFPK 955

Query: 767  KTNLESLLSD---NQTFN-------RGLIIHKLLQVIFTLPEHKRKNFITSYCTKNAKLW 816
              +  +LL     N  F+        G  IH+LLQ +    + ++           +   
Sbjct: 956  GKSFGTLLHSVLENLDFSAPVDAAEIGTAIHELLQHLPFEEDWEQ-ELAEWLEAMLSTPL 1014

Query: 817  PAKEYKNLLLSITRLLENPMMTTAMSCDSYSEVSVSGKINCPKKDIIISGRIDQISISQQ 876
               E   +L  I     +P +      +S    S+   ++   +  ++ G ID +   + 
Sbjct: 1015 EDAERAIILSQILAFFRDPELEFLFPINS-RPFSLLDPLSAGSERGLLQGIIDLLFRHEG 1073

Query: 877  NIFIFEYKTHHHVPQEIEHIPYTHIA------QLSIYEKILKDSYPNKSLVCLLIYVSEP 930
              +I +YKT+        + P   +       QL +Y + L      +     L      
Sbjct: 1074 RYYILDYKTNRLGDDSAAYSPAEAMLKQRYDLQLQLYAEALHRILRKRVKDYALARHFGG 1133

Query: 931  KVFIIP 936
             +++  
Sbjct: 1134 VLYLFL 1139


>gnl|CDD|30559 COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA
           replication, recombination, and repair].
          Length = 655

 Score =  159 bits (403), Expect = 3e-39
 Identities = 133/617 (21%), Positives = 224/617 (36%), Gaps = 126/617 (20%)

Query: 62  IEERFSLLSSFFLTQKFTPQKNIITQEINKKSPDLKEKLKKSQDEFIKIRDRFNTYKMFK 121
            +++ +L+      +     K ++ +E  +   + K  L                    +
Sbjct: 110 SDDQLALIKELLRRELNLDDKELLPREALRYISEAKNALL--SPLEASALLLAAIKSEAE 167

Query: 122 STLASLTLAKYLNAHYEEAKKKNCVLDFEDLIINTNDLLKKR-DVSAWIRYKIDQEINHI 180
             LA L         Y+E  + N  LDF+DL++    LL++  +V   ++ +      +I
Sbjct: 168 KKLAELY------EEYQELLRLNNALDFDDLLLLALRLLEENPEVLEALQARFR----YI 217

Query: 181 LIDEVQDTSLIQWEVIRSLTEDFFVGKNTHSSPRTLFAVGDEKQSIYSFHGAEPKRVLR- 239
           L+DE QDT+ +Q+E+++ L  +             LF VGD+ QSIY F GA+P+ +L  
Sbjct: 218 LVDEFQDTNPLQYELLKLLAGN----------AANLFVVGDDDQSIYGFRGADPENILDF 267

Query: 240 EKRINQKRATNAGQKFSIIELPLSFRSTADILTVVDKVFSIPENAQGLSEDSTTTIRHRS 299
           EK               +I+L  ++RST +IL   +KV                 I +  
Sbjct: 268 EKDFPAA---------KVIKLEQNYRSTPNILAAANKV-----------------IANNK 301

Query: 300 SRIGQVGTVQLWEQVVSQHDSQCNPQQESWTSY-FDSLPQESSASILARRIAYTISNMIG 358
            R  +     L         ++     E       +    E      AR IA  I  +I 
Sbjct: 302 KRQAK----TLR--------TEVEGSGEKVVLLLANDEEDE------ARWIASEIDALI- 342

Query: 359 TDTIFSNGKKRVIQAKDILVLVRKRKDTPLITFLTRFLKNDYKISVVGNDRFILTDHLAI 418
                   +   +   DI +L R    + LI    R     Y+I + G   F   +   I
Sbjct: 343 --------EIGKVNYSDIAILYRTNAQSRLIEEALRAAGIPYRIVIGGTSFF---ERKEI 391

Query: 419 KDLMALGRFILSQEDDLSFVCMLKSPLFNFSEDDIFKICTQRHETETV-------YEYIQ 471
           KDL+A  R +L+ +DD +F+ +L  P     +  + K+     E                
Sbjct: 392 KDLLAYLRLVLNPDDDAAFLRILNLPKRGIGDATLKKLLELARERNLSLLEALKALLSFI 451

Query: 472 KFANCGISKFQHVIKYIHELIHIAQFCSPHDFFTLILGAKKGRQQFISRFGNEVIDV--- 528
           + +  G++      + I EL       +  +    +L A    +  +        +    
Sbjct: 452 RLSERGLALLLDFAELIEELREAILLSTALELIRELLEALGYLEALLEAGSLVAAEDRLE 511

Query: 529 -LDEFLNFTLRNEQNSYSSLQELISELEQYPPTIKRAHSANHNEVRIMTVHTAKGLESPV 587
            L+E L+   R  +    SL+  +SEL       +        +V +MT+H AKGLE P 
Sbjct: 512 NLEELLDVLKRYAEPR-ESLRAFLSELSLLANDEEEEEPDEDGQVNLMTIHAAKGLEFPY 570

Query: 588 VFLVDTGSQVFSHKHIKKMHIMPSLNDDPGIPIWIPQSKSRNNIVSDLIKHLKKSTQEEY 647
           VFLV     +F               D+   P+                        EE 
Sbjct: 571 VFLVGLEEGLFPAD---------RSLDEGDEPL------------------------EEE 597

Query: 648 NRLLYVGMTRASDQLII 664
            RLLYV +TRA  +L +
Sbjct: 598 RRLLYVAITRAKKKLYL 614


>gnl|CDD|144246 pfam00580, UvrD-helicase, UvrD/REP helicase.  The Rep family
           helicases are composed of four structural domains. The
           Rep family function as dimers. REP helicases catalyse
           ATP dependent unwinding of double stranded DNA to single
           stranded DNA. Bacillus subtilis addA and Escherichia
           coli exodeoxyribonuclease V beta have large insertions
           near to the carboxy-terminus relative to other members
           of the family.
          Length = 494

 Score =  132 bits (335), Expect = 4e-31
 Identities = 97/450 (21%), Positives = 160/450 (35%), Gaps = 92/450 (20%)

Query: 82  KNIITQEINKKSPDLKEKLKKSQDEFIKIRDRF-----NTYKMFKSTLASLTLAKYLNAH 136
           K I+ ++       L   L + ++   K ++            + +T      A++    
Sbjct: 117 KEILKKDRLDLDSKLLRPLLELKELISKAKNELLSPEELQQASYAATPRDKLAAEFYQE- 175

Query: 137 YEEAKKKNCVLDFEDLIINTNDLLKKRDVSAWIRYKIDQEINHILIDEVQDTSLIQWEVI 196
           Y+E  K+N  LDF+DL++ T +LL+       +     +   +IL+DE QDT+ IQ+E++
Sbjct: 176 YQERLKENNALDFDDLLLLTLELLRSDP---ELLEAYRERFKYILVDEFQDTNPIQYELL 232

Query: 197 RSLTEDFFVGKNTHSSPRTLFAVGDEKQSIYSFHGAEPKRVLREKRINQKRATNAGQKFS 256
           + L                LF VGD  QSIY F GA+ + +L+ +    K    A     
Sbjct: 233 KLLA----------GGHPNLFLVGDPDQSIYGFRGADIENILKFE----KDFPAA----K 274

Query: 257 IIELPLSFRSTADILTVVDKVFSIPENAQGLSEDSTTTIRHRSSRIGQVGTVQLWEQVVS 316
           +I L  ++RST +IL   +K+                 I + ++R  +         + S
Sbjct: 275 VITLEQNYRSTPEILNAANKL-----------------ISNNTARKEK-------RLLWS 310

Query: 317 QHDSQCNPQQESWTSYFDSLPQESSASILARRIAYTISNMIGTDTIFSNGKKRVIQAKDI 376
           Q  S          +  +           A  IA  I  +              I   DI
Sbjct: 311 QKGSGEKVTVYEAETEQEE----------AEFIADEIKALH--------KSGAAIPFGDI 352

Query: 377 LVLVRKRKDTPLITFLTRFLKNDYKISVVGNDRFILTDHLAIKDLMALGRFILSQEDDLS 436
            VLVR    +  I      LK      ++G   F   D   IKDL+AL R I + +DDL+
Sbjct: 353 AVLVRSNSQSRAI--EEALLKAGIPYKILGGLSFF--DRKEIKDLLALLRLIDNPKDDLA 408

Query: 437 FVCMLKSPLFNFSEDDI--------------FKICTQRHETETVYEYIQKFANCGISKFQ 482
            + +L +P        +              FK   Q  E        +  +     K  
Sbjct: 409 LLRILNTPKRGIGPTTLDKLRNLAKDRQISLFKALNQLLEK-----LNELLSARAYKKLL 463

Query: 483 HVIKYIHELIHIAQFCSPHDFFTLILGAKK 512
             +  I EL  +            +L    
Sbjct: 464 LFLALIEELEKLLLEILLEALLDEVLELLG 493


>gnl|CDD|145939 pfam03055, RPE65, Retinal pigment epithelial membrane protein.
           This family represents a retinal pigment epithelial
           membrane receptor which is abundantly expressed in
           retinal pigment epithelium, and binds plasma retinal
           binding protein. The family also includes the sequence
           related neoxanthin cleavage enzyme in plants and
           lignostilbene-alpha,beta-dioxygenase in bacteria.
          Length = 473

 Score = 34.5 bits (80), Expect = 0.13
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 750 DINEPYILNPSTIDTKGKTNLESLLSDNQTF 780
           +   PY L+P T++T G+ + +  L    TF
Sbjct: 132 EAGLPYRLDPETLETIGRYDFDGQLKPGPTF 162


>gnl|CDD|37319 KOG2108, KOG2108, KOG2108, 3'-5' DNA helicase [Replication,
           recombination and repair].
          Length = 853

 Score = 33.1 bits (75), Expect = 0.37
 Identities = 32/125 (25%), Positives = 46/125 (36%), Gaps = 25/125 (20%)

Query: 147 LDFEDLIINTNDLLKKRDVSAWIRYKIDQEINHILIDEVQDTSLIQWEVIRSLTEDFFVG 206
            D   L +N+  +L+              +I H+L+DE QD   IQ E +        V 
Sbjct: 207 EDSCTLAMNSLKVLQ--RPRVCSN-----KITHVLVDEFQDILKIQLEPL-------QVL 252

Query: 207 KNTHSSPRTLFAVGDEKQSIYSFHGAEPKRVLREKRINQKRATNAGQKFSIIELPLSFRS 266
           K      +     GD  QSIY F G   +  +     N+  AT A + F       + RS
Sbjct: 253 KI-----KAFAGTGDTDQSIYKFAGKWAEIRILYVTFNKFIATQAERLFP------NNRS 301

Query: 267 TADIL 271
              I 
Sbjct: 302 CKTIH 306



 Score = 32.7 bits (74), Expect = 0.55
 Identities = 35/157 (22%), Positives = 58/157 (36%), Gaps = 37/157 (23%)

Query: 568 NHNEVRIMTVHTAKGLESPVVFLVDTGSQVFSHKHIKKMHIMPSLNDDPGIPIWIPQSKS 627
               V + T+H AKGLE   V L +   +VF            S+++   +P +  ++ +
Sbjct: 671 KAENVILGTIHQAKGLEFDNVHLQNDFVKVF-----------GSVSNFERLPSFRVETYN 719

Query: 628 RNNIVSDLIKHLKKSTQEEYNRLLYVGMTRASDQLIICKHSNTSNEKKSNQRTWYDMVYD 687
                           ++E+N  LYV +TRA  +LI+CK  +     K  Q        +
Sbjct: 720 ----------------EDEWN-FLYVAVTRAKKRLIMCKSLHEILTLKGEQ--------E 754

Query: 688 SFHNDERVKKIKLTNSINKDE-WIAYEWSTHHPENTP 723
           SF      +   LT  +N      +   S     N  
Sbjct: 755 SFSQAILTENKLLTGVVNCTVDRCSNAISVTTGLNMK 791


>gnl|CDD|37791 KOG2580, KOG2580, KOG2580, Mitochondrial import inner membrane
           translocase, subunit TIM44 [Intracellular trafficking,
           secretion, and vesicular transport].
          Length = 459

 Score = 32.3 bits (73), Expect = 0.74
 Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 2/78 (2%)

Query: 65  RFSLLSSFFLTQKFTPQKNIITQEINKKSPDLKEKLKKSQDEFIKIRDRFNTYKMFKSTL 124
           R S LS F    +    KN   QE  KK  D   +L++S D   K R ++ T +      
Sbjct: 61  RRSFLSEFSDNVRAELDKNKELQESIKKLKDRAGELEES-DALKKARTKYETAESET-QA 118

Query: 125 ASLTLAKYLNAHYEEAKK 142
           +S  L K L    E  K 
Sbjct: 119 SSEVLKKKLGELKETVKL 136


>gnl|CDD|33647 COG3857, AddB, ATP-dependent nuclease, subunit B [DNA replication,
           recombination, and repair].
          Length = 1108

 Score = 30.7 bits (69), Expect = 2.3
 Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 6/95 (6%)

Query: 861 DIIISGRIDQISISQQNIF--IFEYKTHHHVPQEIEHIPYTHIAQLSIYEKILKDSYPNK 918
           +I++ GRID+I   +++ +  I +YK+  H    +  + Y    QL  Y   +K + P  
Sbjct: 897 EILLRGRIDRIDQLEKDGYLGIVDYKSSAHQFD-LTDVYYGLSLQLMTYLDAIKQNAPED 955

Query: 919 SLV---CLLIYVSEPKVFIIPQNKLNKAFAEISTK 950
            +     L  ++ EP++ +     L+K   E+   
Sbjct: 956 DVKPGGALYFHMHEPEIKLNSDLGLDKIEQELKKS 990


>gnl|CDD|39451 KOG4250, KOG4250, KOG4250, TANK binding protein kinase TBK1 [Signal
           transduction mechanisms].
          Length = 732

 Score = 29.9 bits (67), Expect = 3.6
 Identities = 15/67 (22%), Positives = 23/67 (34%), Gaps = 1/67 (1%)

Query: 540 EQNSYSSLQELISELEQYPPTIKRAHSANHNEVRI-MTVHTAKGLESPVVFLVDTGSQVF 598
             N+  SL E IS+    P   +                    GL+SP+  + D    V 
Sbjct: 333 ADNTLHSLIERISKQTGIPEGKQELLFEGGLSHLEDSAQCIPDGLDSPLYLVSDQDKNVD 392

Query: 599 SHKHIKK 605
             K +K+
Sbjct: 393 ERKILKR 399


>gnl|CDD|33753 COG3972, COG3972, Superfamily I DNA and RNA helicases [General
           function prediction only].
          Length = 660

 Score = 29.6 bits (66), Expect = 4.4
 Identities = 20/95 (21%), Positives = 37/95 (38%), Gaps = 10/95 (10%)

Query: 178 NHILIDEVQDTSLIQWEVIRSLTEDFFVGKNTHSSPRTLFAVGDEKQSIYSFHGAEPKRV 237
           ++ILIDE QD      ++   +T+D           + L    DE Q++ +     P+ +
Sbjct: 297 DYILIDESQDFPQSFIDLCFMVTKD----------KKRLVYAYDELQNLSNVKMRPPEEI 346

Query: 238 LREKRINQKRATNAGQKFSIIELPLSFRSTADILT 272
                  + R   A    + I L   +R++   L 
Sbjct: 347 FGPDSDGEPRVNLARADRNDIVLKKCYRNSPKNLV 381


>gnl|CDD|38789 KOG3582, KOG3582, KOG3582, Mlx interactors and related
           transcription factors [Transcription].
          Length = 856

 Score = 29.3 bits (65), Expect = 5.0
 Identities = 16/78 (20%), Positives = 30/78 (38%), Gaps = 3/78 (3%)

Query: 664 ICKHSNTSNEKKSNQRTWYDMVYDSFHNDERVKKIKLTNSINKDEWIAYEWSTHHPENTP 723
              H +   +++ N +  +D++     N   +  IK TNS +  + + Y   T   E  P
Sbjct: 652 PITHISAEQKRRFNIKLQFDVLNSLSSNSSSLSSIKTTNSNSLQKTVHYINVT-QQERVP 710

Query: 724 LEREETIKQLMDEQKIPK 741
           ++ E     L  E     
Sbjct: 711 VQEEA--HSLRKEISELN 726


>gnl|CDD|32359 COG2176, PolC, DNA polymerase III, alpha subunit (gram-positive
           type) [DNA replication, recombination, and repair].
          Length = 1444

 Score = 29.1 bits (65), Expect = 5.7
 Identities = 31/151 (20%), Positives = 62/151 (41%), Gaps = 16/151 (10%)

Query: 85  ITQEINKKSPDLKEKLKKSQDEFIKIRDRFNTYKMFKSTLASLTLAKYLNAHYEE---AK 141
           IT E+ + +P+++E L+K + EFI          +  +  AS  +  +LN +YE+     
Sbjct: 477 ITDEMLENAPEIEEVLEKFR-EFIGDS-------ILVAHNASFDMG-FLNTNYEKYGLEP 527

Query: 142 KKNCVLDFEDLIINTNDLLKKRDVSAWI-RYKIDQEINHILIDEVQDTSLIQWEVIRSLT 200
             N V+D  +L    N   K   +     +  ++ E +H    + + T+ + +  ++ L 
Sbjct: 528 LTNPVIDTLELARALNPEFKSHRLGTLCKKLGVELERHHRADYDAEATAKVFFVFLKDLK 587

Query: 201 EDFFVGKNTHSSPRTLFAVGDEKQSIYSFHG 231
           E    G    S      +  D  + +   H 
Sbjct: 588 EK---GITNLSELNDKLSSEDLYKRLRPKHA 615


>gnl|CDD|88409 cd05014, SIS_Kpsf, KpsF-like protein. KpsF is an
           arabinose-5-phosphate isomerase which contains SIS
           (Sugar ISomerase) domains. SIS domains are found in many
           phosphosugar isomerases and phosphosugar binding
           proteins. KpsF catalyzes the reversible reaction of
           ribulose 5-phosphate to arabinose 5-phosphate. This is
           the second step in the CMP-Kdo biosynthesis pathway..
          Length = 128

 Score = 28.9 bits (65), Expect = 7.1
 Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 9/80 (11%)

Query: 344 ILARRIAYTISNMIGTDTIF------SNGKKRVIQAKDILVLVRKRKDTPLITFLTRFLK 397
            +AR+IA T+S+  GT   F       +G   ++   D+++ +    +T  +  L   LK
Sbjct: 13  HIARKIAATLSST-GTPAFFLHPTEALHGDLGMVTPGDVVIAISNSGETDELLNLLPHLK 71

Query: 398 ND--YKISVVGNDRFILTDH 415
                 I++ GN    L   
Sbjct: 72  RRGAPIIAITGNPNSTLAKL 91


  Database: CddA
    Posted date:  Feb 4, 2011  9:38 PM
  Number of letters in database: 6,263,737
  Number of sequences in database:  21,609
  
Lambda     K      H
   0.319    0.134    0.385 

Gapped
Lambda     K      H
   0.267   0.0658    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21609
Number of Hits to DB: 11,317,414
Number of extensions: 607063
Number of successful extensions: 1519
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1498
Number of HSP's successfully gapped: 32
Length of query: 952
Length of database: 6,263,737
Length adjustment: 103
Effective length of query: 849
Effective length of database: 4,038,010
Effective search space: 3428270490
Effective search space used: 3428270490
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (27.8 bits)