RPSBLAST alignment of GI: peg_410 and protein with PDBid: 1uaa

>1uaa_A REP helicase, protein (ATP-dependent DNA helicase REP.); complex (helicase/DNA), DNA unwinding, hydrolase/DNA complex; HET: DNA; 3.00A {Escherichia coli} SCOP: c.37.1.19 c.37.1.19 Length = 673

 Score =  112 bits (280), Expect = 4e-25
 Identities = 96/598 (16%), Positives = 182/598 (30%), Gaps = 121/598 (20%)

Query: 82  KNIITQEINKKSPDLKEKLKKSQDEFIKIRDRFNTYKMFKSTLASLTLAKYLNAHYEEAK 141
           K +    I      L++ +    +    ++               +    Y    Y+   
Sbjct: 118 KELTEGLIEDDKVLLQQLISTISNWKNDLKTPSQAAASAIGERDRIFAHCY--GLYDAHL 175

Query: 142 KKNCVLDFEDLIINTNDLLKKRDVSAWIRYKIDQEINHILIDEVQDTSLIQWEVIRSLTE 201
           K   VLDF+DLI+    LL+  +    +R +   +I ++L+DE QDT+  Q+        
Sbjct: 176 KACNVLDFDDLILLPTLLLQANE---EVRKRWQNKIRYLLVDEYQDTNTSQY-------- 224

Query: 202 DFFVGKNTHSSPRTLFAVGDEKQSIYSFHGAEPKRVLREKRINQKRATNAGQKFSIIELP 261
              + K    S      VGD+ QSIYS+ GA P         N    +       +I+L 
Sbjct: 225 --ELVKLLVGSRARFTVVGDDDQSIYSWRGARP--------QNLVLLSQDFPALKVIKLE 274

Query: 262 LSFRSTADILTVVDKVFSIPENAQGLSEDSTTTIRHRSSRIGQVGTVQLWEQVVSQHDSQ 321
            ++RS+  IL   + +                 I +      +    +L      +  S 
Sbjct: 275 QNYRSSGRILKAANIL-----------------IANNPHVFEKRLFSELGYGAELKVLSA 317

Query: 322 CNPQQESWTSYFDSLPQESSASILARRIAYTISNMIGTDTIFSNGKKRVIQAKDILVLVR 381
            N + E+     +                           + ++      Q KD  +L R
Sbjct: 318 NNEEHEAERVTGE---------------------------LIAHHFVNKTQYKDYAILYR 350

Query: 382 KRKDTPLITFLTRFLKNDYKISVVGNDRFILTDHLAIKDLMALGRFILSQEDDLSFVCML 441
               + +       ++N     + G   F       IKDL+A  R + + +DD +F+ ++
Sbjct: 351 GNHQSRVFE--KFLMQNRIPYKISGGTSFF--SRPEIKDLLAYLRVLTNPDDDSAFLRIV 406

Query: 442 KSPLFNFSEDDIFKICTQRHETETVYEYIQKFANCGISKFQHVIKYIHELIHIAQFCSPH 501
            +P        + K+                      +      + +    H        
Sbjct: 407 NTPKREIGPATLKKLGEWAMTRNKSMFTASFDMGLSQTLSGRGYEALTRFTHWLAEIQRL 466

Query: 502 DFFTLI---------------LGAKKGRQQFISRFGNEVIDVLDEFLNFTLRNEQNSYSS 546
                I               L       +        V  +          +E +   +
Sbjct: 467 AEREPIAAVRDLIHGMDYESWLYETSPSPKAAEMRMKNVNQLFSWMTEMLEGSELDEPMT 526

Query: 547 LQELISELEQYPPTIKRAHSANHNEVRIMTVHTAKGLESPVVFLVDTGSQVFSHKHIKKM 606
           L ++++         +       ++V++MT+H +KGLE P V++V        H+     
Sbjct: 527 LTQVVTRFTLRDMMERGESEEELDQVQLMTLHASKGLEFPYVYMVGMEEGFLPHQ----- 581

Query: 607 HIMPSLNDDPGIPIWIPQSKSRNNIVSDLIKHLKKSTQEEYNRLLYVGMTRASDQLII 664
                                           + +   +E  RL YVG+TRA  +L  
Sbjct: 582 ------------------------------SSIDEDNIDEERRLAYVGITRAQKELTF 609