RPSBLAST alignment of GI: peg_410 and protein with PDBid: 2is6

>2is6_A DNA helicase II; hydrolase/DNA complex; HET: DNA ADP; 2.20A {Escherichia coli} PDB: 2is2_A* 2is1_A* 2is4_A* Length = 680
 Score =  135 bits (341), Expect = 4e-32
 Identities = 111/601 (18%), Positives = 210/601 (34%), Gaps = 122/601 (20%)

Query: 81  QKNIITQEINKKSPDLKEKLKKSQDEFIKIRDRFNTYKMFKSTLASL--TLAKYLNAHYE 138
           Q  ++ + I   + D K+   +    +I  +           +  +      + +   Y+
Sbjct: 119 QLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQ 178

Query: 139 EAKKKNCVLDFEDLIINTNDLLKKRDVSAWIRYKIDQEINHILIDEVQDTSLIQWEVIRS 198
           EA  +  ++DF +L++  ++L   +     I     +   +IL+DE QDT+ IQ+  IR 
Sbjct: 179 EACDRAGLVDFAELLLRAHELWLNKP---HILQHYRERFTNILVDEFQDTNNIQYAWIR- 234

Query: 199 LTEDFFVGKNTHSSPRTLFAVGDEKQSIYSFHGAEPKRVLREKRINQKRATNAGQKFSII 258
                            +  VGD+ QSIY + GA+          N +R  N       I
Sbjct: 235 ---------LLAGDTGKVMIVGDDDQSIYGWRGAQV--------ENIQRFLNDFPGAETI 277

Query: 259 ELPLSFRSTADILTVVDKVFSIPENAQGLSEDSTTTIRHRSSRIGQVGTVQLWEQVVSQH 318
            L  ++RST++IL+  + +                 I + + R+G+    +LW       
Sbjct: 278 RLEQNYRSTSNILSAANAL-----------------IENNNGRLGK----KLWTD----- 311

Query: 319 DSQCNPQQESWTSYFDSLPQESSASILARRIAYTISNMIGTDTIFSNGKKRVIQAKDILV 378
               + +  S    F+ L +       AR +   I                     +  +
Sbjct: 312 --GADGEPISLYCAFNELDE-------ARFVVNRIKTWQ----------DNGGALAECAI 352

Query: 379 LVRKRKDTPLITFLTRFLKNDYKISVVGNDRFILTDHLAIKDLMALGRFILSQEDDLSFV 438
           L R    + ++      L+      + G  RF   +   IKD ++  R I+++ DD +F 
Sbjct: 353 LYRSNAQSRVLE--EALLQASMPYRIYGGMRFF--ERQEIKDALSYLRLIVNRNDDAAFE 408

Query: 439 CMLKSPLFNFSEDDIFKICTQRHETETVYEY----------IQKFANCGISKFQHVIKYI 488
            ++ +P     +  +  +     + +               +   A   + +F  +I  +
Sbjct: 409 RVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDAL 468

Query: 489 HELIHIAQFCSPHDFFTLILGAKKGRQQFISRFGNEVIDVLDEFLN----FTLRNEQNSY 544
            +           D      G +   +Q     G   I+ L+E +     F+   E    
Sbjct: 469 AQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDL 528

Query: 545 SSLQELISELEQYPPTIKRAHSANHNEVRIMTVHTAKGLESPVVFLVDTGSQVFSHKHIK 604
             LQ  +S         +       + V++MT+H+AKGLE P VF+V     +F  +   
Sbjct: 529 MPLQAFLSHAALE--AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQM-- 584

Query: 605 KMHIMPSLNDDPGIPIWIPQSKSRNNIVSDLIKHLKKSTQEEYNRLLYVGMTRASDQLII 664
                 SL++   +                          EE  RL YVG+TRA  +L +
Sbjct: 585 ------SLDEGGRL--------------------------EEERRLAYVGVTRAMQKLTL 612

Query: 665 C 665
            
Sbjct: 613 T 613