RPSBLAST alignment of GI: peg_410 and SCOP domain: g1qhh.1

Alignment
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]} Length = 623
 Score =  136 bits (343), Expect = 7e-33
 Identities = 124/617 (20%), Positives = 214/617 (34%), Gaps = 130/617 (21%)

Query: 53  LQQASQTQCIEERFSLLSSFFLTQKFTPQKNIITQEINKKSPDLKEKLKKSQDEFIKIRD 112
           L++      I   FS+L         T Q +++   + +K+ D K+   ++    I    
Sbjct: 100 LRRDIDRIGINRNFSILDP-------TDQLSVMKTILKEKNIDPKKFEPRTILGTISAAK 152

Query: 113 RFNTYKMFKSTLASLTLAKYLNAHYEEAKKKNCVLDFEDLIINTNDLLKKRDVSAWIRYK 172
                    +      +   +   Y++   +N  LDF+DLI+ T  L  +      + + 
Sbjct: 153 NELLPPEQFAKRYYEKVVSDVYQEYQQRLLRNHSLDFDDLIMTTIQLFDRVP---DVLHY 209

Query: 173 IDQEINHILIDEVQDTSLIQWEVIRSLTEDFFVGKNTHSSPRTLFAVGDEKQSIYSFHGA 232
              +  +I IDE QDT+  Q+ +++ L E F          + + AVGD  QSIY + GA
Sbjct: 210 YQYKFQYIHIDEYQDTNRAQYTLVKKLAERF----------QNICAVGDADQSIYRWRGA 259

Query: 233 EPKRVLREKRINQKRATNAGQKFSIIELPLSFRSTADILTVVDKVFSIPENAQGLSEDST 292
           + + +L  +R               I L  ++RST  IL   ++V     N +       
Sbjct: 260 DIQNILSFERDYPNAKV--------ILLEQNYRSTKRILQAANEVIEHNVNRKP------ 305

Query: 293 TTIRHRSSRIGQVGTVQLWEQVVSQHDSQCNPQQESWTSYFDSLPQESSASILARRIAYT 352
                                            +  WT   +  P           +   
Sbjct: 306 ---------------------------------KRIWTENPEGKPIL-----YYEAMNEA 327

Query: 353 ISNMIGTDTIFSNGKKRVIQAKDILVLVRKRKDTPLITFLTRFLKNDYKISVVGNDRFIL 412
                    I    ++   + +D  VL R    + ++      LK +    +VG  +F  
Sbjct: 328 DEAQFVAGRIREAVERGERRYRDFAVLYRTNAQSRVME--EMLLKANIPYQIVGGLKFY- 384

Query: 413 TDHLAIKDLMALGRFILSQEDDLSFVCMLKSPLFNFSEDDIFKICTQRHETETVYEYIQK 472
            D   IKD++A  R I + +DDLS + ++  P        I                   
Sbjct: 385 -DRKEIKDILAYLRVIANPDDDLSLLRIINVPKRGIGASTIDLFEALGELEMIGLGA--- 440

Query: 473 FANCGISKFQHVIKYIHELIHIAQFCSPHDFFTLIL---GAKKGRQQFISRFGNEVIDVL 529
                          + +   + ++ S  +    +L   G ++  +   +      ++ L
Sbjct: 441 ---KAAGALAAFRSQLEQWTQLQEYVSVTELVEEVLDKSGYREMLKAERTIEAQSRLENL 497

Query: 530 DEFLNFTLRNEQNS-YSSLQELISELEQYPPTIKRAHSANHNEVRIMTVHTAKGLESPVV 588
           DEFL+ T   E  S   SL   +++L               + V +MT+H AKGLE PVV
Sbjct: 498 DEFLSVTKHFENVSDDKSLIAFLTDLALISG----------DAVMLMTLHAAKGLEFPVV 547

Query: 589 FLVDTGSQVFSHKHIKKMHIMPSLNDDPGIPIWIPQSKSRNNIVSDLIKHLKKSTQEEYN 648
           FL+     +F H          SL DD  +                          EE  
Sbjct: 548 FLIGMEEGIFPHNR--------SLEDDDEM--------------------------EEER 573

Query: 649 RLLYVGMTRASDQLIIC 665
           RL YVG+TRA ++L++ 
Sbjct: 574 RLAYVGITRAEEELVLT 590

SCOP domain information

class:
fold:
superfamily:
family:
domain:
species: