Query 537021.9.peg.414_1 Match_columns 45 No_of_seqs 1 out of 3 Neff 1.0 Searched_HMMs 13730 Date Tue May 24 19:04:43 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i peg_414.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d2avga1 b.1.1.4 (A:1-110) Card 9.5 68 0.0049 13.5 2.4 23 2-24 83-105 (110) 2 d1w8oa3 b.68.1.1 (A:47-402) Mi 6.6 93 0.0068 12.8 2.4 18 5-22 323-340 (356) 3 d1pkoa_ b.1.1.1 (A:) Myelin ol 5.6 1.1E+02 0.0077 12.5 2.4 21 2-22 92-112 (126) 4 d1sfsa_ c.1.8.8 (A:) Unnamed h 5.2 1.1E+02 0.0082 12.4 1.9 27 19-45 7-33 (213) 5 d1l6za1 b.1.1.1 (A:1-107) Bili 4.9 1.2E+02 0.0086 12.2 1.2 14 3-16 83-96 (107) 6 d1ds6b_ b.1.18.8 (B:) Rho GDP- 4.8 1.1E+02 0.0083 12.3 1.0 24 1-24 146-169 (179) 7 d1kmta_ b.1.18.8 (A:) Rho GDP- 4.7 1.1E+02 0.0081 12.4 0.8 23 1-23 106-128 (138) 8 d1fiua_ c.52.1.10 (A:) Restric 4.4 1.3E+02 0.0094 12.0 2.4 27 11-37 232-258 (286) 9 d1sg5a1 b.137.1.2 (A:1-86) Inh 4.1 1.4E+02 0.01 11.9 1.1 11 6-16 26-36 (86) 10 d1wiua_ b.1.1.4 (A:) Twitchin 3.9 1.4E+02 0.011 11.8 2.4 20 3-22 70-89 (93) No 1 >d2avga1 b.1.1.4 (A:1-110) Cardiac myosin binding protein C, different domains {Human (Homo sapiens) [TaxId: 9606]} Probab=9.51 E-value=68 Score=13.53 Aligned_cols=23 Identities=22% Similarity=0.322 Sum_probs=18.4 Q ss_pred CCCCEEEEEEECCCCEEEEEEEH Q ss_conf 87610268772168146876356 Q 537021.9.peg.4 2 SEGYYPCKVNLENGELNCIFEFQ 24 (45) Q Consensus 2 segyypckvnlengelncifefq 24 (45) .+|.|-|.+.-..|+-.|-|..+ T Consensus 83 D~G~Y~C~a~N~~G~~~~~~~L~ 105 (110) T d2avga1 83 FTGGYRCEVSTKDKFDCSNFNLT 105 (110) T ss_dssp CCEEEEEEEEETTEEEEEEEEEE T ss_pred HCCEEEEEEEECCCEEEEEEEEE T ss_conf 89489999998998599999999 No 2 >d1w8oa3 b.68.1.1 (A:47-402) Micromonospora sialidase, N-terminal domain {Micromonospora viridifaciens [TaxId: 1881]} Probab=6.56 E-value=93 Score=12.79 Aligned_cols=18 Identities=22% Similarity=0.482 Sum_probs=11.7 Q ss_pred CEEEEEEECCCCEEEEEE Q ss_conf 102687721681468763 Q 537021.9.peg.4 5 YYPCKVNLENGELNCIFE 22 (45) Q Consensus 5 yypckvnlengelncife 22 (45) -|||-+.+++|.+-|.|| T Consensus 323 ~Ys~~~~~~dg~i~~~ye 340 (356) T d1w8oa3 323 SYSTLTALPDGTYGLLYE 340 (356) T ss_dssp CCEEEEECTTSCEEEEEC T ss_pred CCCEEEECCCCEEEEEEE T ss_conf 686368958998999998 No 3 >d1pkoa_ b.1.1.1 (A:) Myelin oligodendrocyte glycoprotein (MOG) {Rat (Rattus norvegicus) [TaxId: 10116]} Probab=5.65 E-value=1.1e+02 Score=12.50 Aligned_cols=21 Identities=24% Similarity=0.314 Sum_probs=14.2 Q ss_pred CCCCEEEEEEECCCCEEEEEE Q ss_conf 876102687721681468763 Q 537021.9.peg.4 2 SEGYYPCKVNLENGELNCIFE 22 (45) Q Consensus 2 segyypckvnlengelncife 22 (45) .+|.|-|.|...++.-....+ T Consensus 92 D~G~Y~C~v~~~~~~~~~~v~ 112 (126) T d1pkoa_ 92 DEGGYTCFFRDHSYQEEAAVE 112 (126) T ss_dssp GCEEEEEEEEETTEEEEEEEE T ss_pred HCEEEEEEEEECCCEEEEEEE T ss_conf 786999999978977999999 No 4 >d1sfsa_ c.1.8.8 (A:) Unnamed hypothetical protein {Bacillus stearothermophilus [TaxId: 1422]} Probab=5.23 E-value=1.1e+02 Score=12.36 Aligned_cols=27 Identities=15% Similarity=0.212 Sum_probs=17.5 Q ss_pred EEEEEHHHHHHHHHHHHCCCEEEEECC Q ss_conf 876356999999998721301000119 Q 537021.9.peg.4 19 CIFEFQFVILKKLFDIFGNLRIMGKYL 45 (45) Q Consensus 19 cifefqfvilkklfdifgnlrimgkyl 45 (45) |......-.++.|-+-||...|.|.|| T Consensus 7 ~~~~~t~~~~~~l~~n~Gy~~ivGRYL 33 (213) T d1sfsa_ 7 SAQVVTDQLFQCVRTELGYPKFWGRYL 33 (213) T ss_dssp CSSCCCHHHHHHHHHHTCCCSEEEEES T ss_pred CCCCCCHHHHHHHHHCCCCCEEEEEEC T ss_conf 675478999999986169853898856 No 5 >d1l6za1 b.1.1.1 (A:1-107) Biliary glycoprotein C (CD66a, CEACAM1A[1,4]), N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Probab=4.93 E-value=1.2e+02 Score=12.25 Aligned_cols=14 Identities=29% Similarity=0.294 Sum_probs=10.0 Q ss_pred CCCEEEEEEECCCC Q ss_conf 76102687721681 Q 537021.9.peg.4 3 EGYYPCKVNLENGE 16 (45) Q Consensus 3 egyypckvnlenge 16 (45) +|.|-|+|.-.++. T Consensus 83 ~G~Y~c~v~~~~~~ 96 (107) T d1l6za1 83 MGVYTLDMTDENYR 96 (107) T ss_dssp CEEEEEEEEETTEE T ss_pred CEEEEEEEEECCCC T ss_conf 98999999979987 No 6 >d1ds6b_ b.1.18.8 (B:) Rho GDP-dissociation inhibitor 1, RhoGDI {Human (Homo sapiens) [TaxId: 9606]} Probab=4.80 E-value=1.1e+02 Score=12.33 Aligned_cols=24 Identities=17% Similarity=0.304 Sum_probs=14.9 Q ss_pred CCCCCEEEEEEECCCCEEEEEEEH Q ss_conf 987610268772168146876356 Q 537021.9.peg.4 1 LSEGYYPCKVNLENGELNCIFEFQ 24 (45) Q Consensus 1 lsegyypckvnlengelncifefq 24 (45) |+.|.|+++...-...-+|+.+|. T Consensus 146 laRG~Y~a~s~F~DDD~~~~l~~~ 169 (179) T d1ds6b_ 146 LARGTYHNKSFFTDDDKQDHLSWE 169 (179) T ss_dssp TTCEEEEEEEEEECTTCCCCEEEE T ss_pred EEEECCEEEEEEECCCCCEEEEEE T ss_conf 872211378999849985899988 No 7 >d1kmta_ b.1.18.8 (A:) Rho GDP-dissociation inhibitor 1, RhoGDI {Human (Homo sapiens) [TaxId: 9606]} Probab=4.68 E-value=1.1e+02 Score=12.38 Aligned_cols=23 Identities=17% Similarity=0.371 Sum_probs=14.7 Q ss_pred CCCCCEEEEEEECCCCEEEEEEE Q ss_conf 98761026877216814687635 Q 537021.9.peg.4 1 LSEGYYPCKVNLENGELNCIFEF 23 (45) Q Consensus 1 lsegyypckvnlengelncifef 23 (45) |+.|.|+++...-...-+|..+| T Consensus 106 laRG~Y~a~s~f~Ddd~~~~l~~ 128 (138) T d1kmta_ 106 LARGSYSIKSRFTDDDKTDHLSW 128 (138) T ss_dssp TTCEEEEEEEEEECTTCCCSEEE T ss_pred EEEEEEEEEEEEECCCCCEEEEE T ss_conf 88221047899995999599999 No 8 >d1fiua_ c.52.1.10 (A:) Restriction endonuclease NgoIV {Neisseria gonorrhoeae [TaxId: 485]} Probab=4.44 E-value=1.3e+02 Score=12.05 Aligned_cols=27 Identities=22% Similarity=0.683 Sum_probs=21.5 Q ss_pred EECCCCEEEEEEEHHHHHHHHHHHHCC Q ss_conf 721681468763569999999987213 Q 537021.9.peg.4 11 NLENGELNCIFEFQFVILKKLFDIFGN 37 (45) Q Consensus 11 nlengelncifefqfvilkklfdifgn 37 (45) .|..|++.|++.|..--|..-....|| T Consensus 232 AlGTGDiDcvYHfAL~EL~~a~~~~~~ 258 (286) T d1fiua_ 232 ALGTGEIDCVYHFALYELEQILQSLNY 258 (286) T ss_dssp HSSSSSCSEEEETTHHHHHHHHHHHTC T ss_pred HCCCCCCCEEEEEEHHHHHHHHHHHCC T ss_conf 606787325665208999999998376 No 9 >d1sg5a1 b.137.1.2 (A:1-86) Inhibitor of Rho Rof {Escherichia coli [TaxId: 562]} Probab=4.08 E-value=1.4e+02 Score=11.89 Aligned_cols=11 Identities=27% Similarity=0.501 Sum_probs=0.0 Q ss_pred EEEEEEECCCC Q ss_conf 02687721681 Q 537021.9.peg.4 6 YPCKVNLENGE 16 (45) Q Consensus 6 ypckvnlenge 16 (45) ||+++.|.+|+ T Consensus 26 ~~l~l~l~dG~ 36 (86) T d1sg5a1 26 LMLTLELKDGE 36 (86) T ss_dssp TCEEEECTTTC T ss_pred CCEEEEEECCC T ss_conf 84899993898 No 10 >d1wiua_ b.1.1.4 (A:) Twitchin {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Probab=3.87 E-value=1.4e+02 Score=11.79 Aligned_cols=20 Identities=50% Similarity=0.639 Sum_probs=0.0 Q ss_pred CCCEEEEEEECCCCEEEEEE Q ss_conf 76102687721681468763 Q 537021.9.peg.4 3 EGYYPCKVNLENGELNCIFE 22 (45) Q Consensus 3 egyypckvnlengelncife 22 (45) .|.|-|.+.-+.|+..+.+. T Consensus 70 ~G~Y~c~a~N~~G~~~~~~~ 89 (93) T d1wiua_ 70 SGNYKLKVKNELGEDEAIFE 89 (93) T ss_dssp CEEEEEEEEETTEEEEEEEE T ss_pred CEEEEEEEEECCCEEEEEEE T ss_conf 58999999989978999999 Done!