RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddA 21,609 sequences; 6,263,737 total letters Searching..................................................done Query= 537021.9.peg.414_1 (45 letters) >gnl|CDD|147154 pfam04850, Baculo_E66, Baculovirus E66 occlusion-derived virus envelope protein. Length = 389 Score = 26.1 bits (58), Expect = 2.4 Identities = 7/16 (43%), Positives = 12/16 (75%) Query: 14 NGELNCIFEFQFVILK 29 G + C+F+F +V+LK Sbjct: 306 GGNIKCLFDFPYVVLK 321 >gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337 Score = 24.1 bits (53), Expect = 9.6 Identities = 8/14 (57%), Positives = 10/14 (71%) Query: 24 QFVILKKLFDIFGN 37 + V LKK+FD F N Sbjct: 33 EVVALKKIFDAFRN 46 Database: CddA Posted date: Feb 4, 2011 9:38 PM Number of letters in database: 6,263,737 Number of sequences in database: 21,609 Lambda K H 0.330 0.153 0.475 Gapped Lambda K H 0.267 0.0747 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21609 Number of Hits to DB: 564,490 Number of extensions: 18147 Number of successful extensions: 37 Number of sequences better than 10.0: 1 Number of HSP's gapped: 37 Number of HSP's successfully gapped: 2 Length of query: 45 Length of database: 6,263,737 Length adjustment: 18 Effective length of query: 27 Effective length of database: 5,874,775 Effective search space: 158618925 Effective search space used: 158618925 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.8 bits) S2: 51 (23.4 bits)