RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddB 21,608 sequences; 5,994,473 total letters Searching..................................................done Query= 537021.9.peg.414_1 (45 letters) >gnl|CDD|177629 PHA03393, odv-e66, occlusion-derived virus envelope protein E66; Provisional. Length = 682 Score = 26.0 bits (58), Expect = 2.0 Identities = 6/16 (37%), Positives = 11/16 (68%) Query: 14 NGELNCIFEFQFVILK 29 + C+F+F +V+LK Sbjct: 598 GNSIKCVFDFPYVVLK 613 >gnl|CDD|152719 pfam12284, HoxA13_N, Hox protein A13 N terminal. This family of proteins is found in eukaryotes. Proteins in this family are typically between 149 and 306 amino acids in length. The family is found in association with pfam00046. This family is the N terminal of the Hox gene protein involved in formation of the digital arch of the hands and feet as well as in correct genital formation. Mutation of the protein is associated with hand-foot-genital syndrome. Length = 115 Score = 25.2 bits (55), Expect = 3.5 Identities = 7/16 (43%), Positives = 11/16 (68%) Query: 4 GYYPCKVNLENGELNC 19 GYYPC+++ G +C Sbjct: 76 GYYPCRMSHHGGVKSC 91 >gnl|CDD|180918 PRK07281, PRK07281, methionine aminopeptidase; Reviewed. Length = 286 Score = 24.8 bits (54), Expect = 5.2 Identities = 9/16 (56%), Positives = 12/16 (75%) Query: 14 NGELNCIFEFQFVILK 29 +G L+C +E QFVI K Sbjct: 256 DGGLSCQYEHQFVITK 271 Database: CddB Posted date: Feb 4, 2011 9:54 PM Number of letters in database: 5,994,473 Number of sequences in database: 21,608 Lambda K H 0.330 0.153 0.475 Gapped Lambda K H 0.267 0.0606 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21608 Number of Hits to DB: 712,504 Number of extensions: 26732 Number of successful extensions: 57 Number of sequences better than 10.0: 1 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 4 Length of query: 45 Length of database: 5,994,473 Length adjustment: 18 Effective length of query: 27 Effective length of database: 5,605,529 Effective search space: 151349283 Effective search space used: 151349283 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.8 bits) S2: 50 (23.3 bits)