RPS-BLAST 2.2.22 [Sep-27-2009]

Database: mmdb70 
           33,805 sequences; 4,956,049 total letters

Searching..................................................done

Query= 537021.9.peg.414_1
         (45 letters)



>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel,
          hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
          (A:241-342,A:461-543)
          Length = 185

 Score = 23.7 bits (51), Expect = 9.1
 Identities = 6/17 (35%), Positives = 11/17 (64%)

Query: 10 VNLENGELNCIFEFQFV 26
           N  N EL+ +F+F+ +
Sbjct: 9  SNPVNHELSMVFQFEHI 25


  Database: mmdb70
    Posted date:  Jun 20, 2010  3:12 AM
  Number of letters in database: 4,956,049
  Number of sequences in database:  33,805
  
Lambda     K      H
   0.330    0.153    0.475 

Gapped
Lambda     K      H
   0.267   0.0618    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33805
Number of Hits to DB: 363,123
Number of extensions: 10878
Number of successful extensions: 29
Number of sequences better than 10.0: 1
Number of HSP's gapped: 29
Number of HSP's successfully gapped: 2
Length of query: 45
Length of database: 4,956,049
Length adjustment: 17
Effective length of query: 28
Effective length of database: 4,381,364
Effective search space: 122678192
Effective search space used: 122678192
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 50 (23.3 bits)