HHsearch alignment for GI: peg_42 and conserved domain: pfam00444
>pfam00444 Ribosomal_L36 Ribosomal protein L36.
Probab=99.76 E-value=3.5e-19 Score=117.43 Aligned_cols=38 Identities=47% Similarity=0.730 Sum_probs=35.7
Q ss_pred EEEHHHHHHHHHCCCCCEEEEECCEEEEEECCCCCHHHCCC
Q ss_conf 97458899885016787099988889999877975232079
Q 537021.9.peg.4 4 VKVRNSLRVLKLRHRGNKVVRRKNVIRIVNKLNPRFKVRQG 44 (44)
Q Consensus 4 MKvr~Slk~lk~r~~~c~~VrRkGrvyVick~nPrhK~RQG 44 (44)
T Consensus 1 MKVr~SvKk---~c~~C~~vrR~gr~~Vick~nprhKqRQg 38 (38)
T pfam00444 1 MKVRSSVKK---RCKDCKIVRRKGRVYVICKTNPRHKQRQG 38 (38)
T ss_pred CCHHHHHHH---HCCCCEEEEECCEEEEEECCCCCHHHCCC
T ss_conf 950256672---08887599965789999389973231069