HHsearch alignment of GI: peg_42 and MMDB domain: 3bbo_6_

>3bbo_6 (6:) Ribosomal protein L36; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Arabidopsis thaliana}

Probab=99.77  E-value=1.2e-20  Score=124.41  Aligned_cols=38  Identities=34%  Similarity=0.507  Sum_probs=36.0

Q ss_pred             EEEHHHHHHHHHCCCCCEEEEECCEEEEEECCCCCHHHCCC
Q ss_conf             97458899885016787099988889999877975232079
Q 537021.9.peg.4    4 VKVRNSLRVLKLRHRGNKVVRRKNVIRIVNKLNPRFKVRQG   44 (44)
Q Consensus         4 MKvr~Slk~lk~r~~~c~~VrRkGrvyVick~nPrhK~RQG   44 (44)
                      |||++|||+   ||+||++|||+||+|||||+|||||||||
T Consensus         1 MKVr~slKk---rc~~C~vVrR~Gr~yViCk~nPrhKqrQG   38 (104)
T 3bbo_6            1 MKVRSSVKK---MCEFCKTVKRRGRVYVICSSNPKHKQRQG   38 (104)
T ss_dssp             CBCCSCCCC---CSTTBCCEEETTEEEBCBSSCGGGCBCCC
T ss_pred             CCCHHHHHH---HCCCCEEEEECCEEEEEECCCCCHHHHCC
T ss_conf             971057775---26686399978999998089963543336