HHsearch alignment for GI: peg_472 and conserved domain: CHL00181

Probab=99.56  E-value=1.5e-14  Score=127.46  Aligned_cols=164  Identities=22%  Similarity=0.333  Sum_probs=115.1

Q ss_pred             CCCHHHHHHHHHH---HHHCC-----------CC-CEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH
Q ss_conf             9284899999999---99828-----------76-706201078798888999999999614687778866587899977
Q 537021.9.peg.4    1 MIGQKPMIKTLTN---AFKSG-----------RI-AQSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEH   65 (369)
Q Consensus         1 iiGq~~~~~~l~~---~~~~~-----------~~-~ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~   65 (369)
T Consensus        25 liGL~~VK~~v~~l~~~~~~~~~R~~~Gl~~~~~s~h-~vF~GnPGTGKTTVARl~a~il~-~l-----------G~L--   89 (287)
T CHL00181         25 LIGLVPVKTRIREIAALLLVDRLRKNLGLVSSSPGLH-MSFTGSPGTGKTTVALKMADILY-RL-----------GYI--   89 (287)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE-EEEECCCCCCHHHHHHHHHHHHH-HC-----------CCC--
T ss_conf             4696999999999999999999999879998887653-88878998679999999999999-86-----------995--


Q ss_pred             HHHHHCCCCCCCCCCCCCCC----CC--HHHHHHHHHHHHHHHHCCCCCEEEEECHHHCC---------CCHHHHHHHHH
Q ss_conf             99997798778222453322----33--45556655544565420465237751156648---------00167899999
Q 537021.9.peg.4   66 CQAIIRGNHVDVVELDAASH----TS--IDDVREIIDQIYYKPISARFRVYIMDEVQMLS---------TAAFNGLLKTL  130 (369)
Q Consensus        66 c~~i~~~~~~d~~e~~~~s~----~~--id~ir~l~~~~~~~p~~~~~kv~iid~a~~m~---------~~a~NaLLK~l  130 (369)
T Consensus        90 -------~~g~vve~~r~dLvg~yvG~Ta~kt~~~i~~-------a~GGVLfIDEAY~L~~~~~~~dfg~eaidtLl~~m  155 (287)
T CHL00181         90 -------KKGHLITVTRDDLVGQYIGHTAPKTKEVLKK-------AMGGVLFIDEAYYLYKPDNERDYGAEAIEILLQVM  155 (287)
T ss_pred             -------CCCEEEEECHHHHCCCCCCCCHHHHHHHHHH-------CCCCEEEEECHHHHCCCCCCCCCHHHHHHHHHHHH
T ss_conf             -------5895899535884163535216999999996-------45987998244653578899983799999999998


Q ss_pred             HHCCCCCCEEEEECC--CCCCC---HHHHHHHH-HHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf             721221114665067--54330---35675433-32102454001356787643101345625664456
Q 537021.9.peg.4  131 EEPPPHVKFIFATTE--IRKIP---ITVLSRCQ-RFDLHRISIGDLIELFTKILQEESIEFDPEAVAMI  193 (369)
Q Consensus       131 EEPp~~~~fil~t~~--~~~ll---~TI~SRcq-~~~f~~l~~~~i~~~L~~i~~~E~i~~d~~~l~~i  193 (369)
T Consensus       156 e~~~~~lvvI~AGY~~eM~~fl~~NpGL~sRf~~~i~F~dYt~~EL~~I~~~~~~~~~~~l~~~a~~~l  224 (287)
T CHL00181        156 ENQRDDLVVIFAGYKDRMDKFYESNPGLSSRVANHVDFPDYTPEELLQIAKMMLEEQQYQLTPEAEKVL  224 (287)
T ss_pred             HHCCCCEEEEEECCHHHHHHHHHHCCCHHHHCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH
T ss_conf             707998899984678999999985904787688723779859999999999999986982587999999