HHsearch alignment for GI: peg_472 and conserved domain: COG0466
>COG0466 Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones].
Probab=98.95 E-value=3.4e-09 Score=87.98 Aligned_cols=172 Identities=24% Similarity=0.375 Sum_probs=106.2
Q ss_pred HHHHHHHHHHHHCCCC-CEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC
Q ss_conf 8999999999982876-706201078798888999999999614687778866587899977999977987782224533
Q 537021.9.peg.4 5 KPMIKTLTNAFKSGRI-AQSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAIIRGNHVDVVELDAA 83 (369)
Q Consensus 5 ~~~~~~l~~~~~~~~~-~ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i~~~~~~d~~e~~~~ 83 (369)
T Consensus 333 eRIlEyLAV~~l~~~~kGpILcLVGPPGVGKTSLgkSIA~al~Rkfv-----------------R~sLGGvrDEAEIRGH 395 (782)
T COG0466 333 ERILEYLAVQKLTKKLKGPILCLVGPPGVGKTSLGKSIAKALGRKFV-----------------RISLGGVRDEAEIRGH 395 (782)
T ss_pred HHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEE-----------------EEECCCCCCHHHHCCC
T ss_conf 99999999998614678857999789988701189999999589779-----------------9954765427775355
Q ss_pred CCCCHHHH-HHHHHHHHHHHHCCCCCEEEEECHHHCCCC----HHHHHHHHHHHCCCC----------------CCEEEE
Q ss_conf 22334555-665554456542046523775115664800----167899999721221----------------114665
Q 537021.9.peg.4 84 SHTSIDDV-REIIDQIYYKPISARFRVYIMDEVQMLSTA----AFNGLLKTLEEPPPH----------------VKFIFA 142 (369)
Q Consensus 84 s~~~id~i-r~l~~~~~~~p~~~~~kv~iid~a~~m~~~----a~NaLLK~lEEPp~~----------------~~fil~ 142 (369)
T Consensus 396 RRTYIGaMPGrIiQ~mkk--a~~~NPv~LLDEIDKm~ss~rGDPaSALLEVLD-PEQN~~F~DhYLev~yDLS~VmFiaT 472 (782)
T COG0466 396 RRTYIGAMPGKIIQGMKK--AGVKNPVFLLDEIDKMGSSFRGDPASALLEVLD-PEQNNTFSDHYLEVPYDLSKVMFIAT 472 (782)
T ss_pred CCCCCCCCCHHHHHHHHH--HCCCCCEEEEECHHHCCCCCCCCHHHHHHHHCC-HHHCCCHHHCCCCCCCCHHHEEEEEE
T ss_conf 312335687289999998--677687478640333167777886888886269-76567612220167664432588860
Q ss_pred ECCCCCCCHHHHHHHHHHHCCCCCCHH---H-HHHHH-HHHHH-----CCCCCCHHHHHHHHHC
Q ss_conf 067543303567543332102454001---3-56787-64310-----1345625664456531
Q 537021.9.peg.4 143 TTEIRKIPITVLSRCQRFDLHRISIGD---L-IELFT-KILQE-----ESIEFDPEAVAMIARA 196 (369)
Q Consensus 143 t~~~~~ll~TI~SRcq~~~f~~l~~~~---i-~~~L~-~i~~~-----E~i~~d~~~l~~ia~~ 196 (369)
T Consensus 473 ANsl~tIP~PLlDRMEiI~lsgYt~~EKl~IAk~~LiPk~~~~~gL~~~el~i~d~ai~~iI~~ 536 (782)
T COG0466 473 ANSLDTIPAPLLDRMEVIRLSGYTEDEKLEIAKRHLIPKQLKEHGLKKGELTITDEAIKDIIRY 536 (782)
T ss_pred CCCCCCCCHHHHCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHCCCCCCCEEECHHHHHHHHHH
T ss_conf 3751329867843030564268886999999998445689997599823355658999999998