HHsearch alignment for GI: peg_472 and conserved domain: COG1066

>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones].

Probab=94.09  E-value=0.5  Score=27.72  Aligned_cols=36  Identities=28%  Similarity=0.454  Sum_probs=25.0

Q ss_pred             HHHHHHHCCCCCE-EEHHCCCCCCCHHHHHHHHHHHH
Q ss_conf             9999998287670-62010787988889999999996
Q 537021.9.peg.4   10 TLTNAFKSGRIAQ-SYMLSGTRGIGKTTTARIIARSL   45 (369)
Q Consensus        10 ~l~~~~~~~~~~h-a~lf~G~~G~GK~~~a~~~A~~l   45 (369)
T Consensus        81 EldRVLGGG~V~Gs~iLIgGdPGIGKSTLLLQva~~l  117 (456)
T COG1066          81 ELDRVLGGGLVPGSVILIGGDPGIGKSTLLLQVAARL  117 (456)
T ss_pred             HHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHH
T ss_conf             8876536772366179973689877989999999998