HHsearch alignment for GI: peg_472 and conserved domain: COG2256
>COG2256 MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair].
Probab=100.00 E-value=1.2e-32 Score=261.06 Aligned_cols=243 Identities=28% Similarity=0.418 Sum_probs=200.0
Q ss_pred CCCHHHHH---HHHHHHHHCCCCCEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC
Q ss_conf 92848999---999999982876706201078798888999999999614687778866587899977999977987782
Q 537021.9.peg.4 1 MIGQKPMI---KTLTNAFKSGRIAQSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAIIRGNHVDV 77 (369)
Q Consensus 1 iiGq~~~~---~~l~~~~~~~~~~ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i~~~~~~d~ 77 (369)
T Consensus 26 ~vGQ~HLlg~~~~lrr~v~~~~l~S-mIl~GPPG~GKTTlA~liA~~~~~~----------------------------f 76 (436)
T COG2256 26 VVGQEHLLGEGKPLRRAVEAGHLHS-MILWGPPGTGKTTLARLIAGTTNAA----------------------------F 76 (436)
T ss_pred HCCHHHHHCCCCHHHHHHHCCCCCE-EEEECCCCCCHHHHHHHHHHHHCCC----------------------------E
T ss_conf 5571866189943899996499860-5777899988889999998761776----------------------------6
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCCHHHHHHHHHHHCCCCCCEEEEECC-CC-CCCHHHHH
Q ss_conf 22453322334555665554456542046523775115664800167899999721221114665067-54-33035675
Q 537021.9.peg.4 78 VELDAASHTSIDDVREIIDQIYYKPISARFRVYIMDEVQMLSTAAFNGLLKTLEEPPPHVKFIFATTE-IR-KIPITVLS 155 (369)
Q Consensus 78 ~e~~~~s~~~id~ir~l~~~~~~~p~~~~~kv~iid~a~~m~~~a~NaLLK~lEEPp~~~~fil~t~~-~~-~ll~TI~S 155 (369)
T Consensus 77 ~~~sAv~-~gvkdlr~i~e~a~~~~~~gr~tiLflDEIHRfnK~QQD~lLp~vE~--G~iilIGATTENPsF~ln~ALlS 153 (436)
T COG2256 77 EALSAVT-SGVKDLREIIEEARKNRLLGRRTILFLDEIHRFNKAQQDALLPHVEN--GTIILIGATTENPSFELNPALLS 153 (436)
T ss_pred EEECCCC-CCHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCHHHHHHHHHHHCC--CEEEEEECCCCCCCEEECHHHHH
T ss_conf 9951523-46799999999999987258834998722533374456551033248--86899962678987140388861
Q ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHC--CCC-----CCHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHC--CCCHHHHHH
Q ss_conf 43332102454001356787643101--345-----625664456531676420011000111000000--121032200
Q 537021.9.peg.4 156 RCQRFDLHRISIGDLIELFTKILQEE--SIE-----FDPEAVAMIARASDGSARDGLSLLDQAIARCND--KIVTSSVRL 226 (369)
Q Consensus 156 Rcq~~~f~~l~~~~i~~~L~~i~~~E--~i~-----~d~~~l~~ia~~s~GslR~Al~lLeq~i~~~~~--~i~~e~v~~ 226 (369)
T Consensus 154 R~~vf~lk~L~~~di~~~l~ra~~~~~rgl~~~~~~i~~~a~~~l~~~s~GD~R~aLN~LE~~~~~~~~~~~~~~~~l~~ 233 (436)
T COG2256 154 RARVFELKPLSSEDIKKLLKRALLDEERGLGGQIIVLDEEALDYLVRLSNGDARRALNLLELAALSAEPDEVLILELLEE 233 (436)
T ss_pred HHHEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
T ss_conf 10415651699899999999998654137776556688899999998628619999889999998627775247999999
Q ss_pred CCCCC----------CHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 01356----------77777888876301363346788765430476213578777534
Q 537021.9.peg.4 227 MLALA----------DRNRIMDLFGYLIKGDIINVLQEFSSQYDSGVNPSVILHDLAEF 275 (369)
Q Consensus 227 llg~~----------~~~~i~~Ll~ai~~~d~~~al~~l~~l~~~g~d~~~iL~~Ll~~ 275 (369)
T Consensus 234 ~l~~~~~~~Dk~gD~hYdliSA~hKSvRGSD~dAALyylaRmi~~GeDp~yiARRlv~~ 292 (436)
T COG2256 234 ILQRRSARFDKDGDAHYDLISALHKSVRGSDPDAALYYLARMIEAGEDPLYIARRLVRI 292 (436)
T ss_pred HHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 98655205677763478999999986126883789999999996688789999999999