HHsearch alignment for GI: peg_472 and conserved domain: COG2909

>COG2909 MalT ATP-dependent transcriptional regulator [Transcription].
Probab=97.80  E-value=0.003  Score=44.08  Aligned_cols=174  Identities=13%  Similarity=0.251  Sum_probs=112.1

Q ss_pred             HHHHHHHHCCCCCEEEHHCCCCCCCHHHHHHHHHHH---------HCCCCCCCCCCCC-----------CCCCCCHHHHH
Q ss_conf             999999982876706201078798888999999999---------6146877788665-----------87899977999
Q 537021.9.peg.4    9 KTLTNAFKSGRIAQSYMLSGTRGIGKTTTARIIARS---------LNYKTAHIDVPTV-----------EFEGFGEHCQA   68 (369)
Q Consensus         9 ~~l~~~~~~~~~~ha~lf~G~~G~GK~~~a~~~A~~---------l~c~~~~~~~~~~-----------~~c~~c~~c~~   68 (369)
T Consensus        25 ~rL~~~L~~~~~~RL~li~APAGfGKttl~aq~~~~~~~~~~v~Wlslde~dnd-p~rF~~yLi~al~~~~p~~~~~a~~  103 (894)
T COG2909          25 PRLLDRLRRANDYRLILISAPAGFGKTTLLAQWRELAADGAAVAWLSLDESDND-PARFLSYLIAALQQATPTLGDEAQT  103 (894)
T ss_pred             HHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCC-HHHHHHHHHHHHHHHCCCCCHHHHH
T ss_conf             899999860778438998678877588999999986476554357645776678-8999999999998747232478999


Q ss_pred             HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH--HHHHCCCCCEEEEECHHHCCCCHHH-HHHHHHHHCCCCCCEEEEECC
Q ss_conf             9779877822245332233455566555445--6542046523775115664800167-899999721221114665067
Q 537021.9.peg.4   69 IIRGNHVDVVELDAASHTSIDDVREIIDQIY--YKPISARFRVYIMDEVQMLSTAAFN-GLLKTLEEPPPHVKFIFATTE  145 (369)
Q Consensus        69 i~~~~~~d~~e~~~~s~~~id~ir~l~~~~~--~~p~~~~~kv~iid~a~~m~~~a~N-aLLK~lEEPp~~~~fil~t~~  145 (369)
T Consensus       104 l~q~-------------~~~~~l~~l~~~L~~Ela~~~~p-l~LVlDDyHli~~~~l~~~l~fLl~~~P~~l~lvv~SR~  169 (894)
T COG2909         104 LLQK-------------HQYVSLESLLSSLLNELASYEGP-LYLVLDDYHLISDPALHEALRFLLKHAPENLTLVVTSRS  169 (894)
T ss_pred             HHHH-------------CCCCCHHHHHHHHHHHHHHHCCC-EEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECC
T ss_conf             9873-------------35565999999999998751496-499953532257602899999999719987499997656


Q ss_pred             -CCCCCHHHHHHHHHHHCC----CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCC
Q ss_conf             -543303567543332102----4540013567876431013456256644565316764
Q 537021.9.peg.4  146 -IRKIPITVLSRCQRFDLH----RISIGDLIELFTKILQEESIEFDPEAVAMIARASDGS  200 (369)
Q Consensus       146 -~~~ll~TI~SRcq~~~f~----~l~~~~i~~~L~~i~~~E~i~~d~~~l~~ia~~s~Gs  200 (369)
T Consensus       170 rP~l~la~lRlr~~llEi~~~~Lrf~~eE~~~fl~~---~~~l~Ld~~~~~~L~~~teGW  226 (894)
T COG2909         170 RPQLGLARLRLRDELLEIGSEELRFDTEEAAAFLND---RGSLPLDAADLKALYDRTEGW  226 (894)
T ss_pred             CCCCCCCCEEEHHHHHHCCHHHHCCCHHHHHHHHHH---CCCCCCCHHHHHHHHHHCCCH
T ss_conf             888764420112167751858645785999999997---189977858898788502439