HHsearch alignment for GI: peg_472 and conserved domain: KOG0478
>KOG0478 consensus.
Probab=96.24 E-value=0.0031 Score=44.02 Aligned_cols=146 Identities=18% Similarity=0.196 Sum_probs=79.4
Q ss_pred CCCHHHHHHHHHHHHHCC---------CC---CEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 928489999999999828---------76---706201078798888999999999614687778866587899977999
Q 537021.9.peg.4 1 MIGQKPMIKTLTNAFKSG---------RI---AQSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQA 68 (369)
Q Consensus 1 iiGq~~~~~~l~~~~~~~---------~~---~ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~ 68 (369)
T Consensus 431 Iye~edvKkglLLqLfGGt~k~~~~~~~~R~~IN-ILL~GDPGtsKSqlLqyv~~l~p---Rg~-----yTSGkGsSavG 501 (804)
T KOG0478 431 IYELEDVKKGLLLQLFGGTRKEDEKSGRFRGDIN-ILLVGDPGTSKSQLLQYCHRLLP---RGV-----YTSGKGSSAVG 501 (804)
T ss_pred HHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCE-EEEECCCCCCHHHHHHHHHHHCC---CCE-----EECCCCCCHHC
T ss_conf 5344226666778875687632233444245522-89946998678999999997477---540-----40587630220
Q ss_pred HHCCCCCCCCCCCCCCCCCHHHHHHHH-HHHHHHHHCCCCCEEEEECHHHCCCCHHHHHHHHHHHCCCC-----C-----
Q ss_conf 977987782224533223345556655-54456542046523775115664800167899999721221-----1-----
Q 537021.9.peg.4 69 IIRGNHVDVVELDAASHTSIDDVREII-DQIYYKPISARFRVYIMDEVQMLSTAAFNGLLKTLEEPPPH-----V----- 137 (369)
Q Consensus 69 i~~~~~~d~~e~~~~s~~~id~ir~l~-~~~~~~p~~~~~kv~iid~a~~m~~~a~NaLLK~lEEPp~~-----~----- 137 (369)
T Consensus 502 LTayV------------trd~dtkqlVLesGAL--VLSD~GiCCIDEFDKM~dStrSvLhEvMEQQTvSIAKAGII~sLN 567 (804)
T KOG0478 502 LTAYV------------TKDPDTRQLVLESGAL--VLSDNGICCIDEFDKMSDSTRSVLHEVMEQQTLSIAKAGIIASLN 567 (804)
T ss_pred CEEEE------------EECCCCCEEEEECCCE--EECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC
T ss_conf 03567------------7657655466504848--972896577112333327788999999987631174302234216
Q ss_pred --CEEEEECCCC--------------CCCHHHHHHHHHHHCCCCCCHH
Q ss_conf --1466506754--------------3303567543332102454001
Q 537021.9.peg.4 138 --KFIFATTEIR--------------KIPITVLSRCQRFDLHRISIGD 169 (369)
Q Consensus 138 --~fil~t~~~~--------------~ll~TI~SRcq~~~f~~l~~~~ 169 (369)
T Consensus 568 AR~SVLAaANP~~skynp~k~i~eNI~LpptLLSRFDLIylllD~~DE 615 (804)
T KOG0478 568 ARCSVLAAANPIRSKYNPNKSIIENINLPPTLLSRFDLIFLLLDKPDE 615 (804)
T ss_pred CCCEEEEEECCCCCCCCCCCCHHHCCCCCHHHHHHHCEEEEEECCCCH
T ss_conf 653034453543245799976232167880564323378998427532