HHsearch alignment for GI: peg_472 and conserved domain: KOG0652

Probab=97.46  E-value=0.0014  Score=46.61  Aligned_cols=167  Identities=22%  Similarity=0.272  Sum_probs=80.4

Q ss_pred             CHHHHHHHHHHHHH-----------C-CCCCEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             84899999999998-----------2-87670620107879888899999999961468777886658789997799997
Q 537021.9.peg.4    3 GQKPMIKTLTNAFK-----------S-GRIAQSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAII   70 (369)
Q Consensus         3 Gq~~~~~~l~~~~~-----------~-~~~~ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i~   70 (369)
T Consensus       175 GldkQIqELvEAiVLpmth~ekF~~lgi~pPKGvLmYGPPGTGKTlmARAcAaqT~aTFLKLAgPQL---------VQMf  245 (424)
T KOG0652         175 GLDKQIQELVEAIVLPMTHKEKFENLGIRPPKGVLMYGPPGTGKTLMARACAAQTNATFLKLAGPQL---------VQMF  245 (424)
T ss_pred             CHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHCCHHH---------HHHH
T ss_conf             5789999999886145656878874688899722765799975779999998740106887326477---------7665


Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCC-----------CCHHHHHHHHH---HH--CC
Q ss_conf             7987782224533223345556655544565420465237751156648-----------00167899999---72--12
Q 537021.9.peg.4   71 RGNHVDVVELDAASHTSIDDVREIIDQIYYKPISARFRVYIMDEVQMLS-----------TAAFNGLLKTL---EE--PP  134 (369)
Q Consensus        71 ~~~~~d~~e~~~~s~~~id~ir~l~~~~~~~p~~~~~kv~iid~a~~m~-----------~~a~NaLLK~l---EE--Pp  134 (369)
T Consensus       246 IG--------dGA-----kLVRDAF---aLA-KEkaP~IIFIDElDAIGtKRfDSek~GDREVQRTMLELLNQLDGFss~  308 (424)
T KOG0652         246 IG--------DGA-----KLVRDAF---ALA-KEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSD  308 (424)
T ss_pred             HC--------CHH-----HHHHHHH---HHH-HCCCCEEEEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
T ss_conf             33--------418-----8999999---875-334983899730023233436531234389999999999860489975


Q ss_pred             CCCCEEEEECCCCCCCHHHHHHH----HHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHH-HHHHHHCCC
Q ss_conf             21114665067543303567543----33210245400135678764310134562566-445653167
Q 537021.9.peg.4  135 PHVKFIFATTEIRKIPITVLSRC----QRFDLHRISIGDLIELFTKILQEESIEFDPEA-VAMIARASD  198 (369)
Q Consensus       135 ~~~~fil~t~~~~~ll~TI~SRc----q~~~f~~l~~~~i~~~L~~i~~~E~i~~d~~~-l~~ia~~s~  198 (369)
T Consensus       309 ~~vKvi-AATNRvDiLDPALlRSGRLDRKIEf-P~Pne~aRarIlQIHsR-KMnv~~DvNfeELaRsTd  374 (424)
T KOG0652         309 DRVKVI-AATNRVDILDPALLRSGRLDRKIEF-PHPNEEARARILQIHSR-KMNVSDDVNFEELARSTD  374 (424)
T ss_pred             CCEEEE-EECCCCCCCCHHHHHCCCCCCCCCC-CCCCHHHHHHHHHHHHH-CCCCCCCCCHHHHHHCCC
T ss_conf             626788-5216434348888644664444348-89977898899988640-057788879899853335