HHsearch alignment for GI: peg_472 and conserved domain: KOG0729

Probab=96.72  E-value=0.0038  Score=43.30  Aligned_cols=126  Identities=22%  Similarity=0.306  Sum_probs=67.6

Q ss_pred             CHHHHHHHHHHHHH-----------CC-CCCEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             84899999999998-----------28-7670620107879888899999999961468777886658789997799997
Q 537021.9.peg.4    3 GQKPMIKTLTNAFK-----------SG-RIAQSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAII   70 (369)
Q Consensus         3 Gq~~~~~~l~~~~~-----------~~-~~~ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i~   70 (369)
T Consensus       181 GCKeqIEklREVVE~PlL~PErfv~LGIdPPKGvllyGPPGtGKTL~ARAVANRT------------dAcFIRViGSELV  248 (435)
T KOG0729         181 GCKEQIEKLREVVELPLLHPERFVNLGIDPPKGVLLYGPPGTGKTLCARAVANRT------------DACFIRVIGSELV  248 (435)
T ss_pred             CHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHCCC------------CCEEEEEHHHHHH
T ss_conf             6699999999988432558888875278998733786899986108999874566------------7458763118999


Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCC-------CCHHHHHHHHHHH---------CC
Q ss_conf             7987782224533223345556655544565420465237751156648-------0016789999972---------12
Q 537021.9.peg.4   71 RGNHVDVVELDAASHTSIDDVREIIDQIYYKPISARFRVYIMDEVQMLS-------TAAFNGLLKTLEE---------PP  134 (369)
Q Consensus        71 ~~~~~d~~e~~~~s~~~id~ir~l~~~~~~~p~~~~~kv~iid~a~~m~-------~~a~NaLLK~lEE---------Pp  134 (369)
T Consensus       249 QK------Yv-G---EGARMVRElFeMAr~K----KACiiFFDEiDAiGGaRFDDg~ggDNEVQRTMLEli~QLDGFDpR  314 (435)
T KOG0729         249 QK------YV-G---EGARMVRELFEMARTK----KACIIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPR  314 (435)
T ss_pred             HH------HH-H---HHHHHHHHHHHHHCCC----CEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
T ss_conf             99------86-2---4689999999985236----527998410102267203578887279999999999860377888


Q ss_pred             CCCCEEEEECCCCCCCHHHH
Q ss_conf             21114665067543303567
Q 537021.9.peg.4  135 PHVKFIFATTEIRKIPITVL  154 (369)
Q Consensus       135 ~~~~fil~t~~~~~ll~TI~  154 (369)
T Consensus       315 GNIKVlmATNRPdtLDpALl  334 (435)
T KOG0729         315 GNIKVLMATNRPDTLDPALL  334 (435)
T ss_pred             CCEEEEEECCCCCCCCHHHC
T ss_conf             87589863489887687662