HHsearch alignment for GI: peg_472 and conserved domain: KOG0922

Probab=96.72  E-value=0.0056  Score=42.11  Aligned_cols=133  Identities=25%  Similarity=0.393  Sum_probs=61.3

Q ss_pred             HHHHHHHHCCCCCEEEHHCCCCCCCHHHHH-HHHHHHHCCCCCCCCCCCCCCCC-CCHH-HHHHHC--CCCC--CC-CCC
Q ss_conf             999999982876706201078798888999-99999961468777886658789-9977-999977--9877--82-224
Q 537021.9.peg.4    9 KTLTNAFKSGRIAQSYMLSGTRGIGKTTTA-RIIARSLNYKTAHIDVPTVEFEG-FGEH-CQAIIR--GNHV--DV-VEL   80 (369)
Q Consensus         9 ~~l~~~~~~~~~~ha~lf~G~~G~GK~~~a-~~~A~~l~c~~~~~~~~~~~~c~-~c~~-c~~i~~--~~~~--d~-~e~   80 (369)
T Consensus        57 ~~il~~ve~nq---vlIviGeTGsGKSTQipQyL~eaG~~~~g~I--~~TQPRRVAavslA~RVAeE~~~~lG~~VGY~I  131 (674)
T KOG0922          57 DQILYAVEDNQ---VLIVIGETGSGKSTQIPQYLAEAGFASSGKI--ACTQPRRVAAVSLAKRVAEEMGCQLGEEVGYTI  131 (674)
T ss_pred             HHHHHHHHHCC---EEEEECCCCCCCCCCHHHHHHHCCCCCCCCE--EEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf             99999998787---7999848989853327699986265668827--750671677888999999985897676222699


Q ss_pred             ---CCCC-CCCH----HHHHHHHHHHHHHHHCCCCCEEEEECHH--HCCCCHHHHHHHH-HHHCCCCCCEEE-EECCCCC
Q ss_conf             ---5332-2334----5556655544565420465237751156--6480016789999-972122111466-5067543
Q 537021.9.peg.4   81 ---DAAS-HTSI----DDVREIIDQIYYKPISARFRVYIMDEVQ--MLSTAAFNGLLKT-LEEPPPHVKFIF-ATTEIRK  148 (369)
Q Consensus        81 ---~~~s-~~~i----d~ir~l~~~~~~~p~~~~~kv~iid~a~--~m~~~a~NaLLK~-lEEPp~~~~fil-~t~~~~~  148 (369)
T Consensus       132 RFed~ts~~TrikymTDG--~LLRE~l~Dp~LskYsvIIlDEAHERsl~TDiLlGlLKki~~~R~~LklIimSATlda~k  209 (674)
T KOG0922         132 RFEDSTSKDTRIKYMTDG--MLLREILKDPLLSKYSVIILDEAHERSLHTDILLGLLKKILKKRPDLKLIIMSATLDAEK  209 (674)
T ss_pred             EECCCCCCCEEEEEECCH--HHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECHHH
T ss_conf             845667873369996135--999988508764544489983223101578899999999873277836999923524899