HHsearch alignment for GI: peg_472 and conserved domain: KOG1808

Probab=97.57  E-value=0.00016  Score=53.42  Aligned_cols=149  Identities=21%  Similarity=0.317  Sum_probs=98.9

Q ss_pred             HHHHHHHHHHHHCCCCCEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCC--
Q ss_conf             899999999998287670620107879888899999999961468777886658789997799997798778222453--
Q 537021.9.peg.4    5 KPMIKTLTNAFKSGRIAQSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAIIRGNHVDVVELDA--   82 (369)
Q Consensus         5 ~~~~~~l~~~~~~~~~~ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i~~~~~~d~~e~~~--   82 (369)
T Consensus       426 q~~la~~~~a~~~~~~p--illqG~tssGKtsii~~la~~~-----------------g~~~vrinnhehtd~qeyig~y  486 (1856)
T KOG1808         426 QKNLADLARAISSGKFP--ILLQGPTSSGKTSIIKELARAT-----------------GKNIVRINNHEHTDLQEYIGTY  486 (1856)
T ss_pred             HHHHHHHHHHHHCCCCC--EEEECCCCCCCHHHHHHHHHHH-----------------CCCCEEHHCCCCCHHHHHHHHH
T ss_conf             98899999999658998--6775476768115999999985-----------------4673420024633399998665


Q ss_pred             -CCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCCHHHHHHHHHHH------CCCCC------CE-EEEECCCC-
Q ss_conf             -32233455566555445654204652377511566480016789999972------12211------14-66506754-
Q 537021.9.peg.4   83 -ASHTSIDDVREIIDQIYYKPISARFRVYIMDEVQMLSTAAFNGLLKTLEE------PPPHV------KF-IFATTEIR-  147 (369)
Q Consensus        83 -~s~~~id~ir~l~~~~~~~p~~~~~kv~iid~a~~m~~~a~NaLLK~lEE------Pp~~~------~f-il~t~~~~-  147 (369)
T Consensus       487 ~~~~~g~l~freg~L--V~Alr~G--~~~vlD~lnla~~dvL~aLnrllddnRel~ipe~~rlv~~h~~f~lfatqn~~~  562 (1856)
T KOG1808         487 VADDNGDLVFREGVL--VQALRNG--DWIVLDELNLAPHDVLEALNRLLDDNRELFIPETQRLVKAHPEFMLFATQNPPG  562 (1856)
T ss_pred             EECCCCCEEEEHHHH--HHHHHHC--CEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHCCCCC
T ss_conf             007889725534689--9998708--779840201240678999984045404125634432322470123454307766


Q ss_pred             ------CCCHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf             ------33035675433321024540013567876
Q 537021.9.peg.4  148 ------KIPITVLSRCQRFDLHRISIGDLIELFTK  176 (369)
Q Consensus       148 ------~ll~TI~SRcq~~~f~~l~~~~i~~~L~~  176 (369)
T Consensus       563 ~y~grk~lsRa~~~rf~e~~f~~~~e~e~~~i~~~  597 (1856)
T KOG1808         563 TYGGRKILSRALRNRFIELHFDDIGEEELEEILEH  597 (1856)
T ss_pred             CCCHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHCC
T ss_conf             65315665531444002353552571455556402